Variant report

Variant	rs7851322
Chromosome Location	chr9:117926974-117926975
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7866181	0.82[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv615250	chr9:117768021-118012841	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv916912	chr9:117770039-118014140	Flanking Active TSS Enhancers Strong transcription Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv831697	chr9:117860416-118023927	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv6681	chr9:117893926-117938609	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:47 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:117922000-117944600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr9:117923400-117927600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr9:117925400-117927400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr9:117925400-117928000	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr9:117925600-117927800	Enhancers	HSMM	muscle
6	chr9:117925800-117927400	Enhancers	Placenta Amnion	Placenta Amnion
7	chr9:117925800-117927400	Enhancers	Dnd41	blood
8	chr9:117925800-117927600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr9:117925800-117927600	Enhancers	NHLF	lung
10	chr9:117925800-117927800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr9:117925800-117928000	Enhancers	Brain Germinal Matrix	brain
12	chr9:117925800-117928200	Enhancers	NHDF-Ad	bronchial
13	chr9:117926400-117927400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr9:117926400-117927400	Enhancers	Osteobl	bone
15	chr9:117926400-117927600	Enhancers	Muscle Satellite Cultured Cells	--
16	chr9:117926400-117928800	Enhancers	Breast Myoepithelial Primary Cells	Breast
17	chr9:117926400-117928800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr9:117926400-117931800	Enhancers	NHEK	skin
19	chr9:117926400-117933600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr9:117926600-117927000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr9:117926600-117927000	Enhancers	Brain Substantia Nigra	brain
22	chr9:117926600-117927200	Enhancers	HUES48 Cell Line	embryonic stem cell
23	chr9:117926600-117927200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr9:117926600-117927200	Enhancers	iPS-15b Cell Line	embryonic stem cell
25	chr9:117926600-117927200	Enhancers	Fetal Stomach	stomach
26	chr9:117926600-117927400	Enhancers	ES-I3 Cell Line	embryonic stem cell
27	chr9:117926600-117927400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
28	chr9:117926600-117927400	Enhancers	HUES64 Cell Line	embryonic stem cell
29	chr9:117926600-117927400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr9:117926600-117927400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
31	chr9:117926600-117927400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr9:117926600-117927400	Enhancers	Brain Angular Gyrus	brain
33	chr9:117926600-117927400	Enhancers	Brain Cingulate Gyrus	brain
34	chr9:117926600-117927400	Enhancers	A549	lung
35	chr9:117926600-117927400	Enhancers	NH-A	brain
36	chr9:117926600-117927800	Enhancers	Fetal Lung	lung
37	chr9:117926600-117927800	Enhancers	HMEC	breast
38	chr9:117926600-117927800	Enhancers	HSMMtube	muscle
39	chr9:117926600-117931600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr9:117926800-117927000	Flanking Active TSS	Brain Anterior Caudate	brain
41	chr9:117926800-117927200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr9:117926800-117927200	Enhancers	iPS-18 Cell Line	embryonic stem cell
43	chr9:117926800-117927200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr9:117926800-117927200	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
45	chr9:117926800-117927200	Enhancers	Esophagus	oesophagus
46	chr9:117926800-117927200	Enhancers	Fetal Muscle Leg	muscle
47	chr9:117926800-117927400	Flanking Active TSS	Brain Hippocampus Middle	brain

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