The 2.0 version of rSNPBase

Variant report

Variant rs785206
Chromosome Location chr2:191049454-191049455
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191046000-191074000 Weak transcription HMEC breast
2 chr2:191046000-191088400 Weak transcription HSMMtube muscle
3 chr2:191046200-191061800 Weak transcription Primary T cells from cord blood blood
4 chr2:191046200-191064200 Weak transcription HSMM muscle
5 chr2:191046400-191050000 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr2:191046400-191059200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr2:191046400-191059600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr2:191046400-191060000 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr2:191046400-191061600 Weak transcription Fetal Muscle Leg muscle
10 chr2:191046400-191061800 Weak transcription Fetal Lung lung
11 chr2:191046400-191061800 Weak transcription Fetal Muscle Trunk muscle
12 chr2:191046400-191062000 Weak transcription Adipose Nuclei Adipose
13 chr2:191046400-191062000 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr2:191046400-191063600 Weak transcription HepG2 liver
15 chr2:191046400-191064400 Weak transcription Pancreas Pancrea
16 chr2:191046400-191064400 Weak transcription Psoas Muscle Psoas
17 chr2:191046400-191070400 Weak transcription Fetal Stomach stomach
18 chr2:191046600-191064400 Weak transcription Brain Angular Gyrus brain
19 chr2:191046600-191086400 Weak transcription Colonic Mucosa Colon
20 chr2:191047000-191049600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr2:191047000-191057400 Weak transcription Brain Substantia Nigra brain
22 chr2:191047000-191061800 Weak transcription Primary hematopoietic stem cells blood
23 chr2:191047000-191080400 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr2:191047200-191062000 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr2:191047400-191061800 Weak transcription Primary B cells from cord blood blood
26 chr2:191047600-191081000 Weak transcription Brain Anterior Caudate brain
27 chr2:191048000-191050000 Weak transcription Duodenum Mucosa Duodenum
28 chr2:191048000-191050000 Weak transcription Fetal Intestine Large intestine
29 chr2:191048000-191050200 Weak transcription Left Ventricle heart
30 chr2:191048200-191061800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr2:191048200-191073800 Weak transcription Aorta Aorta
32 chr2:191048400-191049600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr2:191048600-191062000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr2:191048800-191050600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr2:191049000-191049600 Enhancers Brain Inferior Temporal Lobe brain
36 chr2:191049000-191049800 Flanking Active TSS Rectal Mucosa Donor 31 rectum
37 chr2:191049200-191049600 Enhancers Right Atrium heart
38 chr2:191049200-191049600 Enhancers Right Ventricle heart
39 chr2:191049200-191050000 Active TSS K562 blood
40 chr2:191049200-191050200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr2:191049200-191050200 Enhancers Fetal Heart heart
42 chr2:191049200-191050400 Enhancers Fetal Intestine Small intestine
43 chr2:191049200-191064400 Weak transcription Brain Hippocampus Middle brain
44 chr2:191049400-191049600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
45 chr2:191049400-191062000 Weak transcription Brain Cingulate Gyrus brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015