Variant report

Variant	rs7854045
Chromosome Location	chr9:94444475-94444476
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:94444245..94445918-chr9:94451495..94453008,2	K562	blood:
2	chr9:94438317..94440833-chr9:94442989..94444719,2	MCF-7	breast:
3	chr9:93850930..93853677-chr9:94443908..94445787,2	MCF-7	breast:
4	chr9:94195123..94195732-chr9:94443735..94444600,2	MCF-7	breast:
5	chr9:94444042..94444597-chr9:94475780..94476737,2	MCF-7	breast:
6	chr9:94443775..94444780-chr9:94489270..94490122,5	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7849691	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045332	chr9:94352661-94656016	Active TSS Bivalent Enhancer Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1047426	chr9:94363211-94758114	Weak transcription Bivalent Enhancer Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
3	nsv531631	chr9:94373847-94633213	Weak transcription Enhancers Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:94438800-94451000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr9:94440600-94455200	Weak transcription	Fetal Heart	heart
3	chr9:94442400-94445600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr9:94442400-94445600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr9:94443200-94444600	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr9:94443200-94445400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr9:94443400-94444600	Enhancers	Fetal Brain Male	brain
8	chr9:94443600-94444600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr9:94443600-94445600	Enhancers	Placenta	Placenta
10	chr9:94443600-94452400	Weak transcription	Stomach Smooth Muscle	stomach
11	chr9:94443800-94445600	Enhancers	NH-A	brain
12	chr9:94444000-94445600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr9:94444200-94445400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr9:94444200-94445600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr9:94444200-94445600	Enhancers	Osteobl	bone
16	chr9:94444200-94448600	Weak transcription	Primary hematopoietic stem cells	blood
17	chr9:94444200-94453000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr9:94444200-94453200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
19	chr9:94444200-94461400	Weak transcription	Right Atrium	heart
20	chr9:94444400-94444800	Enhancers	iPS-20b Cell Line	embryonic stem cell
21	chr9:94444400-94445600	Enhancers	NHDF-Ad	bronchial

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