Variant report

Variant	rs78600217
Chromosome Location	chr1:85240821-85240822
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv516470	chr1:85239564-85241298	Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:85238000-85241200	Enhancers	HMEC	breast
2	chr1:85238200-85241000	Enhancers	Cortex derived primary cultured neurospheres	brain
3	chr1:85238600-85242000	Weak transcription	Osteobl	bone
4	chr1:85239000-85241400	Weak transcription	Stomach Smooth Muscle	stomach
5	chr1:85239200-85244800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr1:85239600-85241200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr1:85239600-85241200	Enhancers	Brain Anterior Caudate	brain
8	chr1:85239600-85241200	Enhancers	Pancreas	Pancrea
9	chr1:85239800-85241200	Enhancers	Brain Inferior Temporal Lobe	brain
10	chr1:85240000-85241200	Weak transcription	NHEK	skin
11	chr1:85240000-85241600	Enhancers	Breast Myoepithelial Primary Cells	Breast
12	chr1:85240200-85241000	Enhancers	HUES6 Cell Line	embryonic stem cell
13	chr1:85240200-85245200	Weak transcription	Brain Cingulate Gyrus	brain
14	chr1:85240400-85241000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr1:85240400-85241000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
16	chr1:85240400-85244800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
17	chr1:85240600-85241000	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
18	chr1:85240600-85241200	Enhancers	H1 Cell Line	embryonic stem cell
19	chr1:85240600-85243200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr1:85240800-85241000	Enhancers	iPS-20b Cell Line	embryonic stem cell
21	chr1:85240800-85241000	Enhancers	Brain Germinal Matrix	brain
22	chr1:85240800-85241400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
23	chr1:85240800-85245000	Weak transcription	Brain Hippocampus Middle	brain
24	chr1:85240800-85246200	Weak transcription	Esophagus	oesophagus

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