Variant report

Variant	rs78615846
Chromosome Location	chr8:119608132-119608133
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1032681	chr8:119153316-119609948	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv539737	chr8:119153316-119609948	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	nsv891413	chr8:119607281-119679668	Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119600200-119610600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr8:119600600-119622600	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr8:119605600-119610400	Weak transcription	GM12878-XiMat	blood
4	chr8:119605600-119613200	Weak transcription	Duodenum Mucosa	Duodenum
5	chr8:119605800-119631800	Weak transcription	Fetal Intestine Small	intestine
6	chr8:119607000-119609200	Weak transcription	Brain Angular Gyrus	brain
7	chr8:119607200-119608400	Enhancers	Fetal Brain Female	brain
8	chr8:119607200-119609400	Weak transcription	Brain Substantia Nigra	brain
9	chr8:119607200-119610600	Enhancers	Fetal Brain Male	brain
10	chr8:119607800-119609400	Weak transcription	Brain Cingulate Gyrus	brain
11	chr8:119608000-119610400	Enhancers	Brain Hippocampus Middle	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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