| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1008838 |
chr3:140355975-140588726 |
Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Weak transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv877547 |
chr3:140366948-140575287 |
Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv829743 |
chr3:140384246-140559778 |
Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv591865 |
chr3:140396022-140728850 |
Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1005522 |
chr3:140454632-140685915 |
Weak transcription Active TSS Strong transcription Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv536732 |
chr3:140454632-140685915 |
Strong transcription Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv877548 |
chr3:140514022-140590632 |
Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv877549 |
chr3:140521178-140590632 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv4038 |
chr3:140536961-140579494 |
Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
esv1850392 |
chr3:140540011-140550923 |
Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
nsv591866 |
chr3:140542380-140546807 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
esv1835828 |
chr3:140542380-140546916 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 13 |
nsv591867 |
chr3:140542380-140546916 |
Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 14 |
nsv591868 |
chr3:140542380-140547006 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 15 |
esv3461187 |
chr3:140542462-140548960 |
Weak transcription Enhancers Bivalent/Poised TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 16 |
esv3348506 |
chr3:140543262-140548160 |
Bivalent/Poised TSS Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 17 |
esv3461193 |
chr3:140543487-140548235 |
Weak transcription Enhancers Bivalent/Poised TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 18 |
esv3416149 |
chr3:140543712-140548110 |
Bivalent/Poised TSS Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 19 |
esv2486016 |
chr3:140543866-140547877 |
Weak transcription Bivalent/Poised TSS Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:19 , 50 per page) page:
1
