Variant report

Variant	rs78956087
Chromosome Location	chr18:28070197-28070198
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1057946	chr18:27239754-28146129	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription	Chromatin interactive region lncRNA miRNA	1 gene(s)	inside rSNPs	diseases
2	nsv576600	chr18:27423375-28197518	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers	Chromatin interactive region lncRNA miRNA	1 gene(s)	inside rSNPs	diseases
3	esv34009	chr18:27957966-28115014	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv909512	chr18:28066601-28101661	Enhancers Weak transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv909513	chr18:28069559-28114958	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv2542717	chr18:28069579-28072778	Weak transcription Enhancers Genic enhancers	n/a	n/a	inside rSNPs	diseases
7	esv3359296	chr18:28069779-28072327	Weak transcription Enhancers Genic enhancers	n/a	n/a	inside rSNPs	diseases
8	esv3426386	chr18:28069804-28072377	Enhancers Weak transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases
9	esv3340470	chr18:28070104-28072752	Enhancers Weak transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:28066800-28073800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr18:28069600-28070200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr18:28069600-28070200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr18:28069800-28070200	Enhancers	K562	blood
5	chr18:28069800-28070400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr18:28069800-28070400	Enhancers	Placenta Amnion	Placenta Amnion
7	chr18:28069800-28070400	Enhancers	NHEK	skin
8	chr18:28070000-28070200	Genic enhancers	HMEC	breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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