Variant report

Variant	rs7900156
Chromosome Location	chr10:3887165-3887166
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs17329235	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs17330169	1.00[CEU][hapmap]
rs3750860	1.00[ASW][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043680	chr10:3551191-4038002	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	69 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:3881200-3890000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr10:3881600-3892800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr10:3883200-3889000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr10:3883200-3890200	Weak transcription	Adipose Nuclei	Adipose
5	chr10:3886000-3893200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
6	chr10:3886600-3887800	Enhancers	K562	blood
7	chr10:3886800-3887600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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