Variant report

Variant rs790934
Chromosome Location chr13:50697194-50697195
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50658000-50697200 Weak transcription HSMMtube muscle
2 chr13:50659800-50697200 Weak transcription Hela-S3 cervix
3 chr13:50673800-50697600 Weak transcription HSMM muscle
4 chr13:50674000-50697200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr13:50674000-50697600 Weak transcription Esophagus oesophagus
6 chr13:50679200-50697200 Weak transcription NH-A brain
7 chr13:50681400-50697200 Weak transcription Fetal Kidney kidney
8 chr13:50682000-50697200 Weak transcription NHDF-Ad bronchial
9 chr13:50682800-50698000 Weak transcription Ovary ovary
10 chr13:50689000-50697200 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr13:50689200-50697600 Weak transcription Fetal Stomach stomach
12 chr13:50690000-50698000 Weak transcription Gastric stomach
13 chr13:50690200-50697600 Weak transcription Aorta Aorta
14 chr13:50691600-50697200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr13:50694000-50697400 Weak transcription Rectal Smooth Muscle rectum
16 chr13:50694400-50697200 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr13:50694400-50697200 Weak transcription NHLF lung
18 chr13:50694600-50697400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr13:50695000-50697200 Genic enhancers Dnd41 blood
20 chr13:50695000-50697600 Enhancers Pancreas Pancrea
21 chr13:50695000-50697600 Enhancers Psoas Muscle Psoas
22 chr13:50695400-50697600 Enhancers Primary T cells fromperipheralblood blood
23 chr13:50695400-50697600 Enhancers Primary Natural Killer cells fromperipheralblood blood
24 chr13:50695400-50697600 Enhancers Brain Hippocampus Middle brain
25 chr13:50695600-50697200 Enhancers Fetal Heart heart
26 chr13:50695600-50697400 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
27 chr13:50695600-50698000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
28 chr13:50695800-50697200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
29 chr13:50695800-50697200 Enhancers Brain Inferior Temporal Lobe brain
30 chr13:50695800-50697200 Weak transcription Fetal Muscle Trunk muscle
31 chr13:50695800-50697400 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
32 chr13:50695800-50697400 Enhancers Colon Smooth Muscle Colon
33 chr13:50695800-50697600 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
34 chr13:50695800-50697600 Enhancers Primary T helper cells fromperipheralblood blood
35 chr13:50695800-50698000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr13:50696000-50697200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr13:50696000-50697200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr13:50696000-50697200 Weak transcription Fetal Intestine Small intestine
39 chr13:50696000-50697200 Enhancers Pancreatic Islets Pancreatic Islet
40 chr13:50696000-50697200 Enhancers Stomach Smooth Muscle stomach
41 chr13:50696000-50697400 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
42 chr13:50696000-50697400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
43 chr13:50696000-50697400 Enhancers Duodenum Smooth Muscle Duodenum
44 chr13:50696000-50697400 Enhancers Rectal Mucosa Donor 31 rectum
45 chr13:50696000-50697600 Enhancers Brain Substantia Nigra brain
46 chr13:50696000-50697600 Enhancers Duodenum Mucosa Duodenum
47 chr13:50696000-50697600 Enhancers Fetal Adrenal Gland Adrenal Gland
48 chr13:50696000-50697600 Weak transcription Lung lung
49 chr13:50696200-50697200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
50 chr13:50696200-50697200 Enhancers Liver Liver

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