Variant report

Variant	rs7920645
Chromosome Location	chr10:18530839-18530840
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10828333	0.81[CHB][hapmap];0.94[CHD][hapmap];0.84[JPT][hapmap];0.86[ASN][1000 genomes]
rs11013126	0.96[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.97[GIH][hapmap];0.90[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11013137	0.83[CHB][hapmap];0.92[CHD][hapmap];0.82[ASN][1000 genomes]
rs12359413	0.98[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7082041	0.83[MEX][hapmap]
rs7098242	0.88[CHB][hapmap];0.94[CHD][hapmap];0.84[JPT][hapmap];0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs7898536	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs914363	0.84[GIH][hapmap]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs7920645	MEIG1	cis	parietal	SCAN
rs7920645	C10orf113	cis	parietal	SCAN

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18515800-18532000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr10:18523000-18549400	Weak transcription	Pancreas	Pancrea
3	chr10:18523200-18536000	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr10:18526000-18532200	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr10:18526200-18536000	Weak transcription	Right Atrium	heart
6	chr10:18527000-18548800	Weak transcription	Stomach Smooth Muscle	stomach
7	chr10:18530000-18532200	Weak transcription	Fetal Heart	heart
8	chr10:18530000-18545200	Weak transcription	Fetal Lung	lung
9	chr10:18530200-18532400	Weak transcription	Pancreatic Islets	Pancreatic Islet
10	chr10:18530200-18535800	Weak transcription	Left Ventricle	heart
11	chr10:18530200-18543600	Weak transcription	Ovary	ovary
12	chr10:18530400-18532400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr10:18530600-18534200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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