Variant report

Variant	rs7922750
Chromosome Location	chr10:22968946-22968947
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:22968680..22970834-chr10:22971018..22973569,2	K562	blood:
2	chr10:22956707..22959461-chr10:22967862..22970334,2	MCF-7	breast:
3	chr10:22915419..22921147-chr10:22965660..22970538,6	K562	blood:
4	chr10:22966497..22969699-chr10:23002179..23004724,3	K562	blood:

Variant related genes	Relation type
ENSG00000150867	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs12240744	1.00[AMR][1000 genomes]
rs12262524	1.00[AMR][1000 genomes]
rs16922685	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1830947	chr10:22881196-23004381	Weak transcription Flanking Active TSS Enhancers Genic enhancers Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv831809	chr10:22918101-23069676	Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:87 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22949200-22969600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr10:22952000-22970200	Weak transcription	Esophagus	oesophagus
3	chr10:22952400-22970000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr10:22955800-22970200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr10:22956000-22970400	Weak transcription	NHLF	lung
6	chr10:22956200-22970200	Weak transcription	Liver	Liver
7	chr10:22956800-22971600	Weak transcription	Primary B cells from cord blood	blood
8	chr10:22958400-22972200	Enhancers	Primary T helper cells fromperipheralblood	blood
9	chr10:22958600-22971000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
10	chr10:22958600-22975400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
11	chr10:22958800-22969800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr10:22958800-22969800	Weak transcription	Left Ventricle	heart
13	chr10:22959200-22971600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
14	chr10:22959200-22971600	Weak transcription	Duodenum Mucosa	Duodenum
15	chr10:22959200-22980000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr10:22960600-22969800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr10:22960600-22971400	Weak transcription	Right Ventricle	heart
18	chr10:22961800-22979600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr10:22962000-22969400	Weak transcription	Rectal Mucosa Donor 31	rectum
20	chr10:22962000-22969600	Weak transcription	Aorta	Aorta
21	chr10:22962200-22969400	Weak transcription	H9 Cell Line	embryonic stem cell
22	chr10:22962200-22969600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr10:22962200-22969600	Weak transcription	HMEC	breast
24	chr10:22962200-22971400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
25	chr10:22962200-22971600	Weak transcription	Spleen	Spleen
26	chr10:22962600-22974600	Weak transcription	Fetal Muscle Trunk	muscle
27	chr10:22963200-22969400	Weak transcription	A549	lung
28	chr10:22963200-22969600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
29	chr10:22963200-22970200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
30	chr10:22963200-22970800	Weak transcription	Duodenum Smooth Muscle	Duodenum
31	chr10:22963200-22971000	Weak transcription	Cortex derived primary cultured neurospheres	brain
32	chr10:22963200-22971400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
33	chr10:22963200-22972600	Weak transcription	Adipose Nuclei	Adipose
34	chr10:22963400-22969400	Weak transcription	HUES6 Cell Line	embryonic stem cell
35	chr10:22963400-22970200	Weak transcription	NHDF-Ad	bronchial
36	chr10:22963600-22969200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
37	chr10:22963600-22969400	Weak transcription	H1 Cell Line	embryonic stem cell
38	chr10:22964000-22971600	Weak transcription	Fetal Muscle Leg	muscle
39	chr10:22964000-22973600	Weak transcription	Psoas Muscle	Psoas
40	chr10:22964200-22971000	Weak transcription	HSMMtube	muscle
41	chr10:22964400-22969400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr10:22965200-22969800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr10:22965200-22970000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr10:22965200-22971200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
45	chr10:22965400-22970000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr10:22965600-22969600	Weak transcription	Small Intestine	intestine
47	chr10:22965600-22971600	Weak transcription	Fetal Kidney	kidney
48	chr10:22966000-22969400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
49	chr10:22966000-22971400	Enhancers	Dnd41	blood
50	chr10:22966400-22969600	Weak transcription	Right Atrium	heart

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