Variant report
| Variant | rs7929420 |
|---|---|
| Chromosome Location | chr11:45137268-45137269 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr11:45136814..45139069-chr11:45166612..45169418,2 | K562 | blood: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000019485 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:13)
| rs_ID | r2[population] |
|---|---|
| rs10838421 | 0.90[AMR][1000 genomes];0.95[EUR][1000 genomes] |
| rs10838422 | 0.90[AMR][1000 genomes];0.96[EUR][1000 genomes] |
| rs2863154 | 0.89[AMR][1000 genomes];0.93[EUR][1000 genomes] |
| rs2863155 | 0.90[AMR][1000 genomes];0.93[EUR][1000 genomes] |
| rs2902425 | 0.90[AMR][1000 genomes];0.95[EUR][1000 genomes] |
| rs58195346 | 0.90[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs6485591 | 0.89[AMR][1000 genomes];0.96[EUR][1000 genomes] |
| rs6485593 | 0.89[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs7129476 | 0.86[ASN][1000 genomes] |
| rs7131444 | 0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs7478881 | 0.92[EUR][1000 genomes] |
| rs7482212 | 0.89[AMR][1000 genomes];0.95[EUR][1000 genomes] |
| rs963698 | 0.90[AFR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
