Variant report
| Variant | rs79294946 |
|---|---|
| Chromosome Location | chr18:11874346-11874347 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:11852400-11880800 | Weak transcription | Aorta | Aorta |
| 2 | chr18:11853600-11883800 | Weak transcription | Ovary | ovary |
| 3 | chr18:11853800-11884200 | Weak transcription | Brain Substantia Nigra | brain |
| 4 | chr18:11854000-11875000 | Weak transcription | Brain Hippocampus Middle | brain |
| 5 | chr18:11854000-11884200 | Weak transcription | Brain Angular Gyrus | brain |
| 6 | chr18:11854800-11889200 | Weak transcription | Fetal Brain Male | brain |
| 7 | chr18:11855400-11875400 | Weak transcription | Fetal Stomach | stomach |
| 8 | chr18:11855600-11880800 | Weak transcription | Fetal Brain Female | brain |
| 9 | chr18:11857800-11875200 | Weak transcription | Brain Germinal Matrix | brain |
| 10 | chr18:11857800-11876400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 11 | chr18:11858200-11884000 | Weak transcription | Colon Smooth Muscle | Colon |
| 12 | chr18:11858600-11875800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 13 | chr18:11858600-11879400 | Weak transcription | Adipose Nuclei | Adipose |
| 14 | chr18:11859000-11886400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 15 | chr18:11859200-11875600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 16 | chr18:11860200-11875200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 17 | chr18:11860200-11875400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 18 | chr18:11861000-11880800 | Weak transcription | Esophagus | oesophagus |
| 19 | chr18:11861800-11887800 | Weak transcription | Psoas Muscle | Psoas |
| 20 | chr18:11862400-11879200 | Weak transcription | Spleen | Spleen |
| 21 | chr18:11867200-11884000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 22 | chr18:11867200-11884400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 23 | chr18:11867400-11880800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 24 | chr18:11868200-11875400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 25 | chr18:11868800-11877600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 26 | chr18:11869000-11875600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 27 | chr18:11869000-11876000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 28 | chr18:11869000-11877800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 29 | chr18:11869000-11877800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 30 | chr18:11871200-11875400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 31 | chr18:11871600-11884000 | Weak transcription | Colonic Mucosa | Colon |
| 32 | chr18:11871600-11884200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 33 | chr18:11871800-11874600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 34 | chr18:11871800-11875200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 35 | chr18:11871800-11884400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 36 | chr18:11871800-11885000 | Weak transcription | NHEK | skin |
| 37 | chr18:11872400-11875000 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 38 | chr18:11872400-11884400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 39 | chr18:11872400-11884400 | Weak transcription | Hela-S3 | cervix |
| 40 | chr18:11872600-11875200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 41 | chr18:11872800-11880800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 42 | chr18:11873000-11875400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 43 | chr18:11873000-11875400 | Weak transcription | Fetal Intestine Small | intestine |
| 44 | chr18:11873000-11880800 | Weak transcription | Gastric | stomach |
| 45 | chr18:11873000-11880800 | Weak transcription | Right Ventricle | heart |
| 46 | chr18:11873000-11882200 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 47 | chr18:11873000-11884000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 48 | chr18:11873000-11884000 | Weak transcription | Fetal Muscle Leg | muscle |
| 49 | chr18:11873000-11884400 | Weak transcription | HSMM | muscle |
| 50 | chr18:11873000-11887400 | Weak transcription | A549 | lung |
