Variant report

Variant	rs7932029
Chromosome Location	chr11:108774123-108774124
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:108769970..108771676-chr11:108772383..108774669,2	K562	blood:
2	chr11:108773142..108775690-chr11:108777634..108779166,2	K562	blood:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7927863	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052254	chr11:108122683-108845008	Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv541164	chr11:108122683-108845008	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
3	nsv898386	chr11:108409442-108831875	Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
4	nsv898389	chr11:108724639-108891986	Enhancers Active TSS ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:108728400-108810600	Weak transcription	Left Ventricle	heart
2	chr11:108763000-108797600	Weak transcription	Fetal Muscle Leg	muscle
3	chr11:108766600-108775600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr11:108767000-108777200	Weak transcription	Adipose Nuclei	Adipose
5	chr11:108767600-108777000	Weak transcription	HSMM	muscle
6	chr11:108768000-108776400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr11:108768000-108810600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr11:108768200-108776400	Weak transcription	NHEK	skin
9	chr11:108768200-108777000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr11:108768200-108779800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr11:108768600-108776200	Weak transcription	NH-A	brain
12	chr11:108769000-108791200	Weak transcription	Primary B cells from peripheral blood	blood
13	chr11:108769200-108777000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr11:108769200-108777000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr11:108769200-108788600	Weak transcription	Primary T helper cells PMA-I stimulated	--
16	chr11:108769400-108780800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
17	chr11:108769800-108776400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr11:108769800-108776400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr11:108769800-108789600	Weak transcription	Primary B cells from cord blood	blood
20	chr11:108771200-108774800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr11:108771400-108775400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
22	chr11:108772800-108775200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr11:108773000-108774200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr11:108773200-108776400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr11:108773200-108776400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr11:108773200-108776400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr11:108773200-108777200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr11:108773400-108775000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr11:108773400-108775200	Weak transcription	Skeletal Muscle Male	skeletal muscle
30	chr11:108773400-108776200	Weak transcription	Muscle Satellite Cultured Cells	--
31	chr11:108773400-108776400	Weak transcription	A549	lung
32	chr11:108773400-108776800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr11:108773800-108774200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

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