The 2.0 version of rSNPBase

Variant report

Variant rs793251
Chromosome Location chr11:19253049-19253050
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:19239000-19261800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr11:19239600-19259000 Weak transcription Brain Germinal Matrix brain
3 chr11:19240800-19253400 Weak transcription Small Intestine intestine
4 chr11:19240800-19261600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr11:19241000-19254200 Weak transcription Hela-S3 cervix
6 chr11:19241000-19254400 Weak transcription HSMM muscle
7 chr11:19241000-19256000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr11:19241000-19261800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr11:19241800-19261200 Weak transcription Primary B cells from cord blood blood
10 chr11:19243000-19254400 Weak transcription NHDF-Ad bronchial
11 chr11:19243200-19254200 Weak transcription Osteobl bone
12 chr11:19243200-19261600 Weak transcription Placenta Amnion Placenta Amnion
13 chr11:19243400-19255800 Weak transcription Fetal Lung lung
14 chr11:19243800-19259600 Strong transcription Primary neutrophils fromperipheralblood blood
15 chr11:19243800-19261800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr11:19243800-19261800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr11:19244000-19260000 Strong transcription Primary hematopoietic stem cells short term culture blood
18 chr11:19244200-19254600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr11:19244200-19254600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr11:19244200-19259400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr11:19244200-19261800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr11:19244400-19261800 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr11:19244600-19253400 Strong transcription HUVEC blood vessel
24 chr11:19244600-19256000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr11:19244600-19260600 Strong transcription Fetal Thymus thymus
26 chr11:19244800-19253400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr11:19244800-19253600 Strong transcription Primary monocytes fromperipheralblood blood
28 chr11:19244800-19255000 Strong transcription GM12878-XiMat blood
29 chr11:19244800-19259200 Strong transcription Dnd41 blood
30 chr11:19244800-19259400 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr11:19245000-19254000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr11:19245000-19260200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr11:19245400-19254800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr11:19245600-19262000 Weak transcription Spleen Spleen
35 chr11:19246200-19261600 Weak transcription Primary T cells from cord blood blood
36 chr11:19247000-19257600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr11:19247200-19255400 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr11:19247200-19256400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr11:19247200-19261800 Weak transcription Esophagus oesophagus
40 chr11:19247400-19262000 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr11:19247600-19256200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr11:19247600-19256200 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr11:19247800-19259200 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr11:19249000-19259000 Weak transcription HepG2 liver
45 chr11:19249000-19259200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr11:19249200-19253600 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr11:19249400-19253800 Strong transcription HUES6 Cell Line embryonic stem cell
48 chr11:19249400-19256600 Strong transcription Fetal Intestine Large intestine
49 chr11:19249400-19260800 Strong transcription HUES48 Cell Line embryonic stem cell
50 chr11:19249600-19259800 Strong transcription iPS-20b Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015