Variant report

Variant	rs7936242
Chromosome Location	chr11:94370904-94370905
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr11:94370780-94370930	RPTEC	kidney:	n/a	n/a
2	CTCF	chr11:94370760-94370910	SK-N-SH_RA	brain:	n/a	n/a
3	CTCF	chr11:94370780-94370930	SK-N-SH_RA	brain:	n/a	n/a
4	CTCF	chr11:94370800-94370950	HPAF	blood vessel:	n/a	n/a
5	CTCF	chr11:94370768-94370910	NHEK	skin:	n/a	n/a
6	CTCF	chr11:94370820-94370970	HRPEpiC	eye:	n/a	n/a
7	CTCF	chr11:94370800-94370950	HBMEC	blood vessel:	n/a	n/a

Variant related genes	Relation type
ENSG00000233536	TF binding region
ENSG00000255666	TF binding region

rs_ID	r²[population]
rs7926749	1.00[YRI][hapmap]
rs7935527	1.00[YRI][hapmap]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:94363800-94371800	Weak transcription	Primary hematopoietic stem cells	blood
2	chr11:94368000-94374200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr11:94368400-94371600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr11:94368400-94374000	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr11:94368400-94374000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr11:94368600-94371200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr11:94368600-94371200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr11:94368600-94371800	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr11:94369200-94371800	Enhancers	K562	blood
10	chr11:94369600-94371600	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr11:94370000-94371400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr11:94370000-94371400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr11:94370000-94371600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr11:94370000-94374000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr11:94370400-94371200	Genic enhancers	HUES6 Cell Line	embryonic stem cell
16	chr11:94370600-94371000	Enhancers	Brain Substantia Nigra	brain
17	chr11:94370600-94371000	Enhancers	HSMMtube	muscle
18	chr11:94370600-94373800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
19	chr11:94370600-94374600	Enhancers	Placenta	Placenta
20	chr11:94370800-94371000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
21	chr11:94370800-94371200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr11:94370800-94371800	Enhancers	Adipose Nuclei	Adipose
23	chr11:94370800-94371800	Enhancers	Skeletal Muscle Male	skeletal muscle
24	chr11:94370800-94373200	Enhancers	Placenta Amnion	Placenta Amnion
25	chr11:94370800-94373200	Enhancers	Skeletal Muscle Female	skeletal muscle

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