Variant report

Variant	rs7937415
Chromosome Location	chr11:65363958-65363959
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:28)
CpG islands
(count:61)
Chromatin interactive
region (count:4)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:28 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr11:65362618-65364591	Hela-S3	cervix:	n/a	n/a
2	POLR2A	chr11:65363699-65364511	K562	blood:	n/a	n/a
3	POLR2A	chr11:65362450-65364495	PANC-1	pancreas:	n/a	n/a
4	POLR2A	chr11:65363008-65369416	HepG2	liver:	n/a	n/a
5	POLR2A	chr11:65362338-65364483	Hela-S3	cervix:	n/a	n/a
6	POLR2A	chr11:65363316-65364613	GM12892	blood:	n/a	n/a
7	POLR2A	chr11:65363316-65364612	HL-60	blood:	n/a	n/a
8	POLR2A	chr11:65362356-65364511	HUVEC	blood vessel:	n/a	n/a
9	POLR2A	chr11:65363864-65364551	GM12892	blood:	n/a	n/a
10	POLR2A	chr11:65363655-65364001	GM12892	blood:	n/a	n/a
11	POLR2A	chr11:65363689-65364379	HUVEC	blood vessel:	n/a	n/a
12	POLR2A	chr11:65362486-65364408	HepG2	liver:	n/a	n/a
13	POLR2A	chr11:65363535-65364467	HepG2	liver:	n/a	n/a
14	POLR2A	chr11:65363794-65364476	GM12878	blood:	n/a	n/a
15	POLR2A	chr11:65362907-65364623	GM12892	blood:	n/a	n/a
16	POLR2A	chr11:65363438-65364606	SK-N-MC	brain:	n/a	n/a
17	POLR2A	chr11:65360185-65364516	K562	blood:	n/a	n/a
18	POLR2A	chr11:65363303-65364541	GM12891	blood:	n/a	n/a
19	POLR2A	chr11:65363006-65364554	PFSK-1	brain:	n/a	n/a
20	POLR2A	chr11:65363947-65364773	H1-hESC	embryonic stem cell:	n/a	n/a
21	POLR2A	chr11:65362356-65364688	PANC-1	pancreas:	n/a	n/a
22	MTA3	chr11:65362395-65364498	GM12878	blood:	n/a	n/a
23	POLR2A	chr11:65363672-65364454	GM12878	blood:	n/a	n/a
24	POLR2A	chr11:65362340-65364623	GM12878	blood:	n/a	n/a
25	POLR2A	chr11:65363684-65363995	H1-hESC	embryonic stem cell:	n/a	n/a
26	POLR2A	chr11:65362340-65364425	U87	brain:	n/a	n/a
27	POLR2A	chr11:65362340-65364439	U87	brain:	n/a	n/a
28	POLR2A	chr11:65363338-65364634	HUVEC	blood vessel:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:65363954-65364004	ECC-1	luminal epithelium:	n/a
2	chr11:65363954-65364004	SAEC	small airway:	n/a
3	chr11:65363954-65364004	SK-N-SH_RA	brain:	n/a
4	chr11:65363954-65364004	NHBE	bronchial:	n/a
5	chr11:65363954-65364004	Hela-S3	cervix:	n/a
6	chr11:65363954-65364004	U87	brain:	n/a
7	chr11:65363954-65364004	ProgFib	skin:	n/a
8	chr11:65363954-65364004	HepG2	liver:	n/a
9	chr11:65363954-65364004	AG04450	lung:	fetal
10	chr11:65363954-65364004	GM06990	blood:	n/a
11	chr11:65363954-65364004	AG04449	skin:	fetal
12	chr11:65363954-65364004	NHDF-neo	bronchial:	n/a
13	chr11:65363954-65364004	HCF	heart:	n/a
14	chr11:65363954-65364004	HPAEpiC	pulmonary alveolar:	n/a
15	chr11:65363954-65364004	HMEC	breast:	n/a
16	chr11:65363954-65364004	HRCEpiC	kidney:	n/a
17	chr11:65363954-65364004	AG09319	gingival:	n/a
18	chr11:65363954-65364004	HNPCEpiC	eye:	n/a
19	chr11:65363954-65364004	CMK	blood:	n/a
20	chr11:65363954-65364004	HEEpiC	esophagus:	n/a
21	chr11:65363954-65364004	PrEC	prostate:	n/a
22	chr11:65363954-65364004	PFSK-1	brain:	n/a
23	chr11:65363954-65364004	IMR90	lung:	fetal
24	chr11:65363954-65364004	Jurkat	blood:	n/a
25	chr11:65363954-65364004	Hepatocyte	liver:	n/a
26	chr11:65363954-65364004	LNCaP	prostate:	n/a
27	chr11:65363954-65364004	HRE	kidney:	n/a
28	chr11:65363954-65364004	HRPEpiC	eye:	n/a
29	chr11:65363954-65364004	GM12892	blood:	n/a
30	chr11:65363954-65364004	ovcar-3	ovarian:	n/a
31	chr11:65363954-65364004	A549	lung:	n/a
32	chr11:65363954-65364004	BE2_C	brain:	n/a
33	chr11:65363954-65364004	Caco-2	colon:	n/a
34	chr11:65363954-65364004	BJ	skin:	n/a
35	chr11:65363954-65364004	AoSMC	blood vessel:	n/a
36	chr11:65363954-65364004	NB4	blood:	n/a
37	chr11:65363954-65364004	HCM	heart:	n/a
38	chr11:65363954-65364004	SKMC	muscle:	n/a
39	chr11:65363954-65364004	PANC-1	pancreas:	n/a
40	chr11:65363954-65364004	HEK293	kidney:	embryo
41	chr11:65363954-65364004	HIPEpiC	eye:	n/a
42	chr11:65363954-65364004	SK-N-MC	brain:	n/a
43	chr11:65363954-65364004	NT2-D1	testis:	n/a
44	chr11:65363954-65364004	GM12878	blood:	n/a
45	chr11:65363954-65364004	T-47D	breast:	n/a
46	chr11:65363954-65364004	HL-60	blood:	n/a
47	chr11:65363954-65364004	HAEpiC	amniotic membrane:	n/a
48	chr11:65363954-65364004	NH-A	brain:	n/a
49	chr11:65363954-65364004	RPTEC	kidney:	n/a
50	chr11:65363954-65364004	MCF10A-Er-Src	breast:	n/a

(count:4 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:65360399..65364379-chr11:65381821..65384245,5	MCF-7	breast:
2	chr11:65363478..65365098-chr11:65415778..65418255,2	MCF-7	breast:
3	chr11:65351177..65356604-chr11:65359918..65365733,9	MCF-7	breast:
4	chr11:65357424..65360571-chr11:65362628..65364282,3	MCF-7	breast:

No data

Variant related genes	Relation type
KCNK7	TF binding region
ENSG00000269018	TF binding region
KCNK7	CpG island
ENSG00000269018	CpG island
ENSG00000265874	Chromatin interaction
ENSG00000197136	Chromatin interaction
ENSG00000269018	Chromatin interaction
ENSG00000173327	Chromatin interaction
ENSG00000213445	Chromatin interaction
ENSG00000173442	Chromatin interaction

Extended variants
information (count: 52 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10750762	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10750763	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10791819	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10791820	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10791821	1.00[CEU][hapmap];0.90[GIH][hapmap];1.00[TSI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10896019	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10896021	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10896022	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11227230	0.82[EUR][1000 genomes]
rs11227234	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11227235	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1151503	1.00[CEU][hapmap];0.95[GIH][hapmap];1.00[MEX][hapmap];0.88[TSI][hapmap];0.85[EUR][1000 genomes]
rs2298615	0.95[CEU][hapmap]
rs34278912	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3814752	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4326800	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7924714	0.96[ASN][1000 genomes]
rs7932616	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7946115	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs948577	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:32 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897715	chr11:65083491-65427346	Enhancers Genic enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	984 gene(s)	inside rSNPs	diseases
2	nsv897716	chr11:65083491-65481166	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	999 gene(s)	inside rSNPs	diseases
3	nsv897718	chr11:65140209-65577516	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1003 gene(s)	inside rSNPs	diseases
4	nsv541069	chr11:65142779-65368787	Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	965 gene(s)	inside rSNPs	diseases
5	nsv541070	chr11:65142779-65397058	Flanking Active TSS Active TSS Enhancers Genic enhancers Bivalent Enhancer Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	972 gene(s)	inside rSNPs	diseases
6	nsv541071	chr11:65142779-65429352	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	984 gene(s)	inside rSNPs	diseases
7	nsv541074	chr11:65171202-65368787	Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	961 gene(s)	inside rSNPs	diseases
8	nsv541076	chr11:65210592-65397058	Flanking Active TSS Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	645 gene(s)	inside rSNPs	diseases
9	nsv897720	chr11:65213434-65445950	Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	665 gene(s)	inside rSNPs	diseases
10	nsv897721	chr11:65278461-65422853	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
11	nsv897722	chr11:65278461-65436888	Genic enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
12	nsv897723	chr11:65294830-65481166	Transcr. at gene 5' and 3' Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
13	nsv897730	chr11:65302893-65376484	Strong transcription Genic enhancers Weak transcription Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
14	nsv468599	chr11:65335705-65427346	ZNF genes & repeats Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	78 gene(s)	inside rSNPs	diseases
15	nsv555213	chr11:65335705-65427346	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	78 gene(s)	inside rSNPs	diseases
16	nsv897732	chr11:65335705-65427346	Enhancers Genic enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	78 gene(s)	inside rSNPs	diseases
17	nsv468600	chr11:65335705-65431360	Genic enhancers Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	92 gene(s)	inside rSNPs	diseases
18	nsv555214	chr11:65335705-65431360	Weak transcription Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	92 gene(s)	inside rSNPs	diseases
19	nsv897733	chr11:65335705-65431360	Active TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	92 gene(s)	inside rSNPs	diseases
20	nsv897734	chr11:65335705-65436888	Flanking Active TSS Enhancers Genic enhancers Active TSS ZNF genes & repeats Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	92 gene(s)	inside rSNPs	diseases
21	nsv897735	chr11:65335705-65481166	Flanking Active TSS Enhancers Strong transcription Genic enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
22	nsv897736	chr11:65335705-65676516	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	227 gene(s)	inside rSNPs	diseases
23	nsv897738	chr11:65337714-65380248	Genic enhancers Active TSS Strong transcription Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
24	nsv897739	chr11:65337714-65388300	Genic enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Strong transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
25	nsv897740	chr11:65338589-65371604	Weak transcription Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Strong transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
26	nsv897741	chr11:65338589-65376484	Flanking Active TSS Genic enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
27	nsv897742	chr11:65338589-65380248	Active TSS Enhancers Genic enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
28	nsv897743	chr11:65338589-65382564	Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
29	nsv897745	chr11:65339099-65367253	Strong transcription Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
30	esv2761680	chr11:65344328-65391317	Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	46 gene(s)	inside rSNPs	diseases
31	nsv897746	chr11:65349756-65427346	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
32	nsv897747	chr11:65353906-65481166	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	78 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs7937415	MYEOV	cis	cerebellum	SCAN
rs7937415	SNX32	cis	parietal	SCAN

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:65346000-65364000	Genic enhancers	Fetal Muscle Leg	muscle
2	chr11:65349400-65365000	Weak transcription	Ovary	ovary
3	chr11:65355800-65370800	Weak transcription	Small Intestine	intestine
4	chr11:65356200-65365000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr11:65356400-65365200	Weak transcription	Psoas Muscle	Psoas
6	chr11:65356600-65365000	Weak transcription	HepG2	liver
7	chr11:65356800-65376400	Strong transcription	Primary neutrophils fromperipheralblood	blood
8	chr11:65357800-65371200	Weak transcription	GM12878-XiMat	blood
9	chr11:65358200-65365200	Weak transcription	A549	lung
10	chr11:65358200-65370600	Weak transcription	NHDF-Ad	bronchial
11	chr11:65359600-65365200	Weak transcription	Fetal Lung	lung
12	chr11:65359800-65364200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr11:65359800-65365000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr11:65359800-65365200	Weak transcription	Aorta	Aorta
15	chr11:65360400-65365000	Weak transcription	Liver	Liver
16	chr11:65360400-65365000	Weak transcription	NH-A	brain
17	chr11:65360600-65365000	Weak transcription	Pancreas	Pancrea
18	chr11:65360600-65365000	Weak transcription	HUVEC	blood vessel
19	chr11:65360800-65364000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
20	chr11:65360800-65365000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr11:65360800-65365000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr11:65361000-65374000	Weak transcription	Fetal Brain Male	brain
23	chr11:65361200-65365200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr11:65361200-65374200	Strong transcription	Fetal Intestine Small	intestine
25	chr11:65361400-65365000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
26	chr11:65361400-65365000	Weak transcription	Primary hematopoietic stem cells	blood
27	chr11:65361400-65365000	Weak transcription	Duodenum Smooth Muscle	Duodenum
28	chr11:65361400-65365000	Weak transcription	Osteobl	bone
29	chr11:65361400-65365200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
30	chr11:65361400-65365200	Weak transcription	Left Ventricle	heart
31	chr11:65361400-65365400	Weak transcription	Dnd41	blood
32	chr11:65361400-65366200	Weak transcription	Fetal Kidney	kidney
33	chr11:65361400-65372600	Weak transcription	H9 Cell Line	embryonic stem cell
34	chr11:65361600-65364000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
35	chr11:65361600-65364200	Weak transcription	Brain Anterior Caudate	brain
36	chr11:65361600-65365000	Weak transcription	Muscle Satellite Cultured Cells	--
37	chr11:65361600-65365000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
38	chr11:65361600-65365000	Weak transcription	Rectal Mucosa Donor 31	rectum
39	chr11:65361600-65365200	Weak transcription	Brain Germinal Matrix	brain
40	chr11:65361800-65364800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
41	chr11:65361800-65365000	Weak transcription	HUES64 Cell Line	embryonic stem cell
42	chr11:65361800-65365000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr11:65361800-65365000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr11:65361800-65365000	Weak transcription	Brain Substantia Nigra	brain
45	chr11:65361800-65365000	Weak transcription	NHLF	lung
46	chr11:65361800-65365200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
47	chr11:65361800-65365800	Weak transcription	HUES48 Cell Line	embryonic stem cell
48	chr11:65361800-65370600	Weak transcription	HSMM	muscle
49	chr11:65362000-65364000	Weak transcription	Brain Hippocampus Middle	brain
50	chr11:65362000-65364800	Weak transcription	Brain Cingulate Gyrus	brain

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