Variant report

Variant	rs79485117
Chromosome Location	chr7:139835660-139835661
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:139835350..139837806-chr7:139871502..139873375,2	K562	blood:
2	chr7:139834453..139836366-chr7:139847949..139849894,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019001	chr7:139558216-139841268	Enhancers Bivalent/Poised TSS Flanking Active TSS Genic enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	nsv1029099	chr7:139558216-139869148	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:82 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:139785000-139839600	Weak transcription	NHDF-Ad	bronchial
2	chr7:139796600-139848600	Weak transcription	Fetal Heart	heart
3	chr7:139798000-139845600	Weak transcription	K562	blood
4	chr7:139800000-139839400	Weak transcription	Brain Angular Gyrus	brain
5	chr7:139800000-139842200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
6	chr7:139801200-139840200	Weak transcription	Gastric	stomach
7	chr7:139808000-139838800	Strong transcription	Primary neutrophils fromperipheralblood	blood
8	chr7:139808000-139839000	Strong transcription	Monocytes-CD14+_RO01746	blood
9	chr7:139808200-139839000	Strong transcription	Primary monocytes fromperipheralblood	blood
10	chr7:139809000-139838400	Strong transcription	Primary T helper cells fromperipheralblood	blood
11	chr7:139809200-139855000	Weak transcription	Aorta	Aorta
12	chr7:139809400-139840200	Weak transcription	Lung	lung
13	chr7:139809400-139841200	Weak transcription	Small Intestine	intestine
14	chr7:139809400-139847400	Weak transcription	Right Ventricle	heart
15	chr7:139809600-139874800	Weak transcription	Brain Hippocampus Middle	brain
16	chr7:139812400-139874600	Weak transcription	Fetal Stomach	stomach
17	chr7:139813000-139870200	Weak transcription	Spleen	Spleen
18	chr7:139813400-139842200	Weak transcription	Stomach Mucosa	stomach
19	chr7:139813400-139846800	Weak transcription	Fetal Muscle Leg	muscle
20	chr7:139813400-139848200	Weak transcription	Brain Inferior Temporal Lobe	brain
21	chr7:139813600-139836200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr7:139813800-139838200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr7:139815800-139836600	Strong transcription	HepG2	liver
24	chr7:139815800-139838800	Strong transcription	Primary T helper cells PMA-I stimulated	--
25	chr7:139815800-139838800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
26	chr7:139820000-139874400	Weak transcription	Primary hematopoietic stem cells	blood
27	chr7:139822000-139855200	Weak transcription	Pancreas	Pancrea
28	chr7:139822600-139844400	Weak transcription	Esophagus	oesophagus
29	chr7:139823600-139839400	Weak transcription	Brain Cingulate Gyrus	brain
30	chr7:139824200-139837800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr7:139826000-139839000	Strong transcription	Primary B cells from peripheral blood	blood
32	chr7:139826200-139849400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr7:139827200-139836200	Weak transcription	Fetal Intestine Small	intestine
34	chr7:139828800-139860200	Weak transcription	Colonic Mucosa	Colon
35	chr7:139829400-139838600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
36	chr7:139831400-139874800	Weak transcription	Thymus	Thymus
37	chr7:139831600-139845200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr7:139832200-139847600	Weak transcription	HUES64 Cell Line	embryonic stem cell
39	chr7:139832200-139856200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr7:139832400-139836000	Weak transcription	HUES6 Cell Line	embryonic stem cell
41	chr7:139832600-139848600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
42	chr7:139833000-139846400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
43	chr7:139833000-139855000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr7:139833200-139835800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
45	chr7:139833200-139836200	Weak transcription	Fetal Intestine Large	intestine
46	chr7:139833200-139839800	Weak transcription	Stomach Smooth Muscle	stomach
47	chr7:139833200-139841200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr7:139833200-139847600	Weak transcription	HUES48 Cell Line	embryonic stem cell
49	chr7:139833200-139848800	Weak transcription	Skeletal Muscle Male	skeletal muscle
50	chr7:139833200-139849400	Weak transcription	Colon Smooth Muscle	Colon

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