Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11050616	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11050617	0.87[ASN][1000 genomes]
rs11050618	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11050623	0.86[EUR][1000 genomes]
rs11050627	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11050628	0.86[EUR][1000 genomes]
rs11050629	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11050631	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11050632	1.00[EUR][1000 genomes]
rs11050635	0.86[EUR][1000 genomes]
rs11531052	0.86[EUR][1000 genomes]
rs11532273	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11559800	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11561211	1.00[EUR][1000 genomes]
rs12229030	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs1319488	0.86[EUR][1000 genomes]
rs16935329	1.00[EUR][1000 genomes]
rs1825523	0.86[EUR][1000 genomes]
rs2173393	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4930878	1.00[EUR][1000 genomes]
rs4930880	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs58982576	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529328	chr12:29692414-30246209	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv948495	chr12:30090771-30344772	ZNF genes & repeats Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv826295	chr12:30130336-30207775	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv1042081	chr12:30147993-30344670	Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv541436	chr12:30147993-30344670	Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:30205400-30206200	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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