The 2.0 version of rSNPBase

Variant report

Variant rs7973081
Chromosome Location chr12:104178229-104178230
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:104153200-104185200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr12:104154400-104186400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr12:104157400-104191200 Weak transcription HUVEC blood vessel
4 chr12:104160400-104185800 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr12:104163000-104178400 Strong transcription NHEK skin
6 chr12:104163600-104185000 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr12:104163600-104204200 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr12:104165800-104193400 Weak transcription Fetal Lung lung
9 chr12:104166400-104188400 Weak transcription Fetal Thymus thymus
10 chr12:104167200-104199800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr12:104168000-104178800 Weak transcription Hela-S3 cervix
12 chr12:104168000-104185200 Weak transcription Brain Germinal Matrix brain
13 chr12:104168000-104190800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr12:104168600-104180800 Strong transcription Stomach Smooth Muscle stomach
15 chr12:104169000-104197800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr12:104169200-104180200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr12:104169600-104184800 Weak transcription Placenta Amnion Placenta Amnion
18 chr12:104170400-104179200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
19 chr12:104170400-104180400 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr12:104170600-104179400 Strong transcription Primary B cells from peripheral blood blood
21 chr12:104171200-104193600 Weak transcription Primary hematopoietic stem cells blood
22 chr12:104171400-104188200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr12:104171600-104187400 Weak transcription Brain Cingulate Gyrus brain
24 chr12:104171600-104194000 Weak transcription Brain Substantia Nigra brain
25 chr12:104171800-104187600 Weak transcription Fetal Brain Female brain
26 chr12:104171800-104216000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr12:104172400-104186400 Weak transcription Brain Hippocampus Middle brain
28 chr12:104172400-104191400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr12:104173000-104179400 Strong transcription iPS-20b Cell Line embryonic stem cell
30 chr12:104173400-104179000 Strong transcription Ovary ovary
31 chr12:104173600-104178600 Weak transcription Fetal Kidney kidney
32 chr12:104173800-104208800 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr12:104174000-104180400 Strong transcription HUES6 Cell Line embryonic stem cell
34 chr12:104174000-104180400 Strong transcription HMEC breast
35 chr12:104174000-104194200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr12:104174200-104179200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr12:104174200-104179200 Weak transcription NHDF-Ad bronchial
38 chr12:104174200-104185200 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr12:104174200-104186200 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr12:104174400-104179800 Enhancers Skeletal Muscle Male skeletal muscle
41 chr12:104174800-104180400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr12:104175000-104179800 Enhancers Skeletal Muscle Female skeletal muscle
43 chr12:104175000-104180600 Strong transcription HSMM muscle
44 chr12:104175000-104187000 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr12:104175200-104179200 Strong transcription A549 lung
46 chr12:104175200-104190000 Weak transcription ES-WA7 Cell Line embryonic stem cell
47 chr12:104175400-104179600 Strong transcription iPS-18 Cell Line embryonic stem cell
48 chr12:104175600-104179200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr12:104175800-104179200 Strong transcription Primary neutrophils fromperipheralblood blood
50 chr12:104175800-104180400 Strong transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015