The 2.0 version of rSNPBase

Variant report

Variant rs7977922
Chromosome Location chr12:123020823-123020824
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:123012400-123022000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr12:123012400-123029400 Weak transcription Ovary ovary
3 chr12:123012400-123035000 Weak transcription Lung lung
4 chr12:123012400-123036600 Weak transcription Esophagus oesophagus
5 chr12:123012400-123066000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr12:123012400-123114000 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr12:123012400-123117000 Weak transcription Pancreas Pancrea
8 chr12:123012400-123121200 Weak transcription Aorta Aorta
9 chr12:123012600-123021400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr12:123012600-123024400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr12:123012600-123031600 Weak transcription Placenta Amnion Placenta Amnion
12 chr12:123012600-123032000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr12:123012600-123036600 Weak transcription Left Ventricle heart
14 chr12:123012600-123042600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr12:123012600-123066200 Weak transcription Psoas Muscle Psoas
16 chr12:123012600-123095600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr12:123012800-123021400 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr12:123012800-123027600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr12:123012800-123032000 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr12:123012800-123032000 Weak transcription Brain Cingulate Gyrus brain
21 chr12:123012800-123036200 Weak transcription Brain Anterior Caudate brain
22 chr12:123012800-123036800 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr12:123012800-123037200 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr12:123012800-123037600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr12:123012800-123042000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr12:123012800-123042000 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr12:123012800-123065800 Weak transcription Brain Substantia Nigra brain
28 chr12:123012800-123097400 Weak transcription Brain Angular Gyrus brain
29 chr12:123012800-123109200 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr12:123013000-123021400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr12:123013000-123021400 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr12:123013000-123021400 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr12:123013000-123021400 Weak transcription Stomach Smooth Muscle stomach
34 chr12:123013000-123029400 Weak transcription Duodenum Mucosa Duodenum
35 chr12:123013000-123029400 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr12:123013000-123030800 Weak transcription Adipose Nuclei Adipose
37 chr12:123013000-123030800 Weak transcription Fetal Lung lung
38 chr12:123013000-123031800 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr12:123013000-123037000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr12:123013000-123076400 Weak transcription Right Ventricle heart
41 chr12:123013000-123109200 Weak transcription Colon Smooth Muscle Colon
42 chr12:123013200-123021200 Weak transcription Muscle Satellite Cultured Cells --
43 chr12:123013200-123034000 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr12:123013200-123035200 Weak transcription Liver Liver
45 chr12:123013200-123036200 Weak transcription Fetal Kidney kidney
46 chr12:123013200-123036600 Weak transcription Spleen Spleen
47 chr12:123013200-123037600 Weak transcription Small Intestine intestine
48 chr12:123013200-123045800 Strong transcription Fetal Thymus thymus
49 chr12:123013200-123050000 Strong transcription HUES48 Cell Line embryonic stem cell
50 chr12:123013200-123103000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015