Variant report

Variant	rs7980049
Chromosome Location	chr12:124291534-124291535
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498024	chr12:123994372-124459856	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:124286800-124292000	Weak transcription	Gastric	stomach
2	chr12:124287800-124292600	Enhancers	Fetal Brain Male	brain
3	chr12:124288000-124292000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr12:124290000-124291800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr12:124290200-124291600	Weak transcription	Brain Cingulate Gyrus	brain
6	chr12:124290200-124291600	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr12:124290200-124291800	Weak transcription	Brain Hippocampus Middle	brain
8	chr12:124290200-124291800	Weak transcription	Brain Substantia Nigra	brain
9	chr12:124290800-124292000	Weak transcription	Fetal Brain Female	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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