The 2.0 version of rSNPBase

Variant report

Variant rs7983238
Chromosome Location chr13:97766439-97766440
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:97760600-97770200 Enhancers Fetal Stomach stomach
2 chr13:97762000-97770600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr13:97762400-97767000 Enhancers Rectal Smooth Muscle rectum
4 chr13:97762600-97768000 Enhancers A549 lung
5 chr13:97762800-97766800 Enhancers Fetal Lung lung
6 chr13:97762800-97766800 Weak transcription Placenta Amnion Placenta Amnion
7 chr13:97762800-97766800 Weak transcription HUVEC blood vessel
8 chr13:97762800-97767000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr13:97762800-97767000 Weak transcription Adipose Nuclei Adipose
10 chr13:97762800-97767000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr13:97762800-97767000 Weak transcription NHLF lung
12 chr13:97762800-97767200 Weak transcription Stomach Mucosa stomach
13 chr13:97762800-97767400 Weak transcription Liver Liver
14 chr13:97762800-97767400 Weak transcription Hela-S3 cervix
15 chr13:97762800-97768800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr13:97762800-97773600 Weak transcription K562 blood
17 chr13:97763400-97767200 Enhancers Colon Smooth Muscle Colon
18 chr13:97763400-97767400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr13:97763600-97769000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr13:97763600-97770800 Enhancers Ovary ovary
21 chr13:97764000-97766600 Weak transcription Gastric stomach
22 chr13:97764200-97767400 Enhancers Skeletal Muscle Male skeletal muscle
23 chr13:97764600-97767200 Enhancers HSMMtube muscle
24 chr13:97764800-97767400 Enhancers Stomach Smooth Muscle stomach
25 chr13:97764800-97768800 Enhancers Fetal Muscle Trunk muscle
26 chr13:97765400-97768000 Enhancers Cortex derived primary cultured neurospheres brain
27 chr13:97765600-97766800 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr13:97765600-97767000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr13:97765600-97767400 Enhancers Brain Angular Gyrus brain
30 chr13:97765600-97768000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr13:97765600-97770800 Enhancers Skeletal Muscle Female skeletal muscle
32 chr13:97765800-97766600 Enhancers Primary T helper 17 cells PMA-I stimulated --
33 chr13:97765800-97767800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
34 chr13:97765800-97767800 Enhancers Fetal Brain Female brain
35 chr13:97765800-97767800 Enhancers Fetal Intestine Small intestine
36 chr13:97765800-97768000 Enhancers Brain Germinal Matrix brain
37 chr13:97765800-97770200 Enhancers Fetal Adrenal Gland Adrenal Gland
38 chr13:97766000-97766800 Enhancers Esophagus oesophagus
39 chr13:97766000-97767200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr13:97766000-97767400 Enhancers HSMM muscle
41 chr13:97766000-97768000 Enhancers Right Atrium heart
42 chr13:97766000-97768600 Enhancers Fetal Muscle Leg muscle
43 chr13:97766000-97768600 Enhancers Placenta Placenta
44 chr13:97766000-97768800 Enhancers Duodenum Smooth Muscle Duodenum
45 chr13:97766000-97768800 Enhancers Left Ventricle heart
46 chr13:97766000-97770200 Enhancers Aorta Aorta
47 chr13:97766000-97770400 Enhancers Fetal Heart heart
48 chr13:97766200-97766600 Bivalent Enhancer NHDF-Ad bronchial
49 chr13:97766200-97767000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
50 chr13:97766200-97767000 Enhancers Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015