Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10492503	1.00[CEU][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10492505	0.96[CEU][hapmap];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12872259	0.89[CHB][hapmap]
rs12875742	1.00[CEU][hapmap];0.87[GIH][hapmap];0.81[MEX][hapmap];0.88[TSI][hapmap]
rs1330995	0.82[YRI][hapmap]
rs1411750	1.00[CEU][hapmap]
rs16947178	0.89[CHB][hapmap];0.89[CHD][hapmap]
rs1831463	1.00[CEU][hapmap];0.87[GIH][hapmap];0.81[MEX][hapmap];0.88[TSI][hapmap];0.94[EUR][1000 genomes]
rs2148521	0.82[YRI][hapmap]
rs2182533	0.82[YRI][hapmap]
rs35616509	0.83[ASN][1000 genomes]
rs4408406	0.82[YRI][hapmap]
rs4771855	0.96[CEU][hapmap];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6650316	0.82[YRI][hapmap]
rs7334533	0.82[YRI][hapmap]
rs7336644	0.82[YRI][hapmap]
rs7987675	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.90[JPT][hapmap];0.91[MEX][hapmap];0.97[TSI][hapmap]
rs9556160	0.96[CEU][hapmap];1.00[GIH][hapmap];0.81[MEX][hapmap];0.97[TSI][hapmap]
rs9556161	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9560983	0.82[YRI][hapmap]
rs9560984	0.82[YRI][hapmap]
rs9560986	0.82[YRI][hapmap]
rs9560988	0.82[YRI][hapmap]
rs9560989	0.95[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2756005	chr13:92584199-93080799	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv456066	chr13:92694581-92884370	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv562723	chr13:92694581-92884370	Flanking Active TSS Active TSS Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv1035365	chr13:92805325-92926114	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv1053468	chr13:92814581-92893231	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	nsv456067	chr13:92868073-92967664	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv562726	chr13:92868073-92967664	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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