Variant report

Variant rs7992603
Chromosome Location chr13:50022089-50022090
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50017200-50022200 Active TSS K562 blood
2 chr13:50017200-50022400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
3 chr13:50019400-50036200 Weak transcription Esophagus oesophagus
4 chr13:50019600-50022200 Weak transcription Ovary ovary
5 chr13:50019600-50022400 Enhancers Fetal Heart heart
6 chr13:50019600-50024200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
7 chr13:50019600-50028200 Weak transcription Fetal Stomach stomach
8 chr13:50019600-50028600 Weak transcription Fetal Lung lung
9 chr13:50019600-50034400 Weak transcription Adipose Nuclei Adipose
10 chr13:50019600-50035400 Weak transcription Brain Inferior Temporal Lobe brain
11 chr13:50019600-50035400 Weak transcription Brain Substantia Nigra brain
12 chr13:50019600-50035800 Weak transcription Left Ventricle heart
13 chr13:50019600-50035800 Weak transcription HSMM muscle
14 chr13:50019600-50036000 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr13:50019800-50022800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr13:50019800-50023200 Enhancers Primary T helper naive cells fromperipheralblood blood
17 chr13:50019800-50023200 Enhancers Primary T helper cells fromperipheralblood blood
18 chr13:50019800-50023400 Enhancers Primary T killer naive cells fromperipheralblood blood
19 chr13:50019800-50028400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr13:50019800-50028600 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr13:50019800-50035200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr13:50019800-50035200 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr13:50019800-50035200 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr13:50019800-50035800 Weak transcription Brain Cingulate Gyrus brain
25 chr13:50019800-50035800 Weak transcription Fetal Muscle Leg muscle
26 chr13:50019800-50037400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr13:50019800-50037400 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr13:50020000-50026400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr13:50020000-50026400 Weak transcription Fetal Intestine Large intestine
30 chr13:50020000-50035600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr13:50020000-50035600 Weak transcription Fetal Muscle Trunk muscle
32 chr13:50020000-50037200 Weak transcription Right Ventricle heart
33 chr13:50020200-50023000 Enhancers Primary T helper 17 cells PMA-I stimulated --
34 chr13:50020200-50023400 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr13:50020200-50024800 Enhancers Primary T helper naive cells from peripheral blood blood
36 chr13:50020200-50026400 Weak transcription Fetal Thymus thymus
37 chr13:50020200-50028200 Weak transcription Primary T cells fromperipheralblood blood
38 chr13:50020200-50028200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr13:50020200-50034600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr13:50020200-50035400 Weak transcription Placenta Placenta
41 chr13:50020200-50035800 Weak transcription Pancreas Pancrea
42 chr13:50020200-50068400 Weak transcription HMEC breast
43 chr13:50020600-50022200 Enhancers Muscle Satellite Cultured Cells --
44 chr13:50020600-50022600 Weak transcription Hela-S3 cervix
45 chr13:50020600-50035800 Weak transcription Thymus Thymus
46 chr13:50020800-50022400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
47 chr13:50020800-50023000 Enhancers Rectal Smooth Muscle rectum
48 chr13:50021000-50022400 Enhancers Osteobl bone
49 chr13:50021000-50023200 Enhancers Primary T regulatory cells fromperipheralblood blood
50 chr13:50021000-50035000 Weak transcription Rectal Mucosa Donor 31 rectum

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