The 2.0 version of rSNPBase

Variant report

Variant rs79942906
Chromosome Location chr8:68159770-68159771
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:68104600-68193000 Strong transcription Primary neutrophils fromperipheralblood blood
2 chr8:68104600-68215600 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr8:68104800-68182400 Strong transcription Primary T helper cells fromperipheralblood blood
4 chr8:68105000-68184400 Strong transcription Primary monocytes fromperipheralblood blood
5 chr8:68113000-68172600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr8:68135200-68184400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr8:68139000-68178000 Weak transcription Small Intestine intestine
8 chr8:68139600-68161400 Weak transcription Fetal Brain Male brain
9 chr8:68139800-68162200 Weak transcription A549 lung
10 chr8:68146000-68168200 Strong transcription Primary hematopoietic stem cells short term culture blood
11 chr8:68149600-68167200 Weak transcription Fetal Heart heart
12 chr8:68149800-68173000 Weak transcription Psoas Muscle Psoas
13 chr8:68150600-68161600 Weak transcription H9 Cell Line embryonic stem cell
14 chr8:68151200-68159800 Weak transcription HSMMtube muscle
15 chr8:68151200-68161000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr8:68151200-68161000 Weak transcription HSMM muscle
17 chr8:68151200-68161000 Weak transcription NH-A brain
18 chr8:68153600-68181000 Strong transcription Rectal Mucosa Donor 31 rectum
19 chr8:68153800-68168400 Strong transcription Fetal Thymus thymus
20 chr8:68154000-68170800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr8:68154800-68159800 Weak transcription Brain Inferior Temporal Lobe brain
22 chr8:68154800-68162000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr8:68154800-68175600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr8:68155000-68161200 Weak transcription GM12878-XiMat blood
25 chr8:68155000-68179200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr8:68155200-68162200 Weak transcription H1 Cell Line embryonic stem cell
27 chr8:68155200-68172400 Weak transcription Stomach Mucosa stomach
28 chr8:68155200-68173600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr8:68155400-68160800 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr8:68155400-68161400 Weak transcription Placenta Amnion Placenta Amnion
31 chr8:68155400-68161600 Weak transcription Brain Substantia Nigra brain
32 chr8:68155400-68161600 Weak transcription Left Ventricle heart
33 chr8:68155400-68162000 Weak transcription Pancreas Pancrea
34 chr8:68155400-68162200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr8:68155400-68167400 Weak transcription Brain Angular Gyrus brain
36 chr8:68155600-68160400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr8:68155600-68160400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr8:68155600-68161000 Weak transcription Osteobl bone
39 chr8:68155600-68161200 Weak transcription Colonic Mucosa Colon
40 chr8:68155600-68161200 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr8:68155600-68161600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr8:68155600-68173200 Weak transcription Esophagus oesophagus
43 chr8:68155600-68175400 Weak transcription Aorta Aorta
44 chr8:68155600-68175400 Weak transcription Hela-S3 cervix
45 chr8:68155600-68193800 Strong transcription HUES64 Cell Line embryonic stem cell
46 chr8:68155800-68159800 Weak transcription Stomach Smooth Muscle stomach
47 chr8:68155800-68160800 Weak transcription Spleen Spleen
48 chr8:68155800-68161400 Weak transcription Brain Cingulate Gyrus brain
49 chr8:68155800-68161600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr8:68155800-68162000 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015