Variant report

Variant	rs7995905
Chromosome Location	chr13:39476332-39476333
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1360645	0.82[ASN][1000 genomes]
rs1413101	0.85[ASN][1000 genomes]
rs1945499	0.83[ASN][1000 genomes]
rs2156811	0.87[ASN][1000 genomes]
rs914897	0.87[ASN][1000 genomes]
rs9548539	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9548540	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754118	chr13:39347702-40222644	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:39476200-39477400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr13:39476200-39477400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr13:39476200-39477600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr13:39476200-39477600	Enhancers	HMEC	breast

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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