Variant report

Variant	rs7997930
Chromosome Location	chr13:80482897-80482898
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7982849	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv438256	chr13:80479404-80503110	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:80476000-80484800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr13:80479800-80484800	Weak transcription	Brain Anterior Caudate	brain
3	chr13:80479800-80485000	Weak transcription	Brain Cingulate Gyrus	brain
4	chr13:80479800-80489000	Weak transcription	Brain Angular Gyrus	brain
5	chr13:80480000-80484200	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr13:80480200-80485000	Weak transcription	Brain Substantia Nigra	brain
7	chr13:80480600-80484400	Weak transcription	Fetal Brain Female	brain
8	chr13:80482200-80485400	Enhancers	Fetal Lung	lung
9	chr13:80482400-80483200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr13:80482400-80484400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr13:80482600-80484200	Weak transcription	Fetal Brain Male	brain
12	chr13:80482800-80484400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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