The 2.0 version of rSNPBase

Variant report

Variant rs7999663
Chromosome Location chr13:50342963-50342964
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50266400-50349000 Weak transcription Esophagus oesophagus
2 chr13:50300600-50345600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr13:50306000-50351600 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr13:50308000-50356000 Weak transcription Fetal Kidney kidney
5 chr13:50317600-50343600 Weak transcription Primary T cells from cord blood blood
6 chr13:50321000-50363800 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr13:50324600-50350800 Weak transcription HSMM muscle
8 chr13:50324600-50351000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr13:50326200-50349000 Weak transcription Left Ventricle heart
10 chr13:50328400-50349000 Weak transcription Lung lung
11 chr13:50328600-50349000 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr13:50330800-50349000 Weak transcription HepG2 liver
13 chr13:50334000-50352200 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr13:50334200-50351200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr13:50334400-50350800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr13:50334400-50351400 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr13:50334600-50350200 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr13:50335000-50356400 Weak transcription Primary B cells from cord blood blood
19 chr13:50335200-50347200 Weak transcription Primary B cells from peripheral blood blood
20 chr13:50335200-50349400 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr13:50335400-50343000 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr13:50336200-50364800 Weak transcription Fetal Intestine Small intestine
23 chr13:50336400-50351600 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr13:50336600-50352400 Weak transcription Thymus Thymus
25 chr13:50336600-50353800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr13:50336800-50364600 Weak transcription NHLF lung
27 chr13:50338000-50349800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr13:50338000-50353800 Weak transcription Dnd41 blood
29 chr13:50338200-50343600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr13:50338200-50345400 Weak transcription Fetal Muscle Trunk muscle
31 chr13:50338200-50346000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr13:50338800-50345600 Weak transcription Ovary ovary
33 chr13:50338800-50345800 Weak transcription Psoas Muscle Psoas
34 chr13:50339200-50353800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr13:50339200-50355800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr13:50339200-50358800 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr13:50339800-50358800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr13:50340600-50351200 Weak transcription A549 lung
39 chr13:50341200-50359400 Weak transcription Primary hematopoietic stem cells blood
40 chr13:50342800-50343800 Enhancers GM12878-XiMat blood

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Last update: Aug 31, 2015