Variant report

Variant	rs8000366
Chromosome Location	chr13:48783695-48783696
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv541766	chr13:48703229-48857639	Weak transcription Strong transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
2	esv3327569	chr13:48743550-48798094	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv1043294	chr13:48762477-48810028	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	12 gene(s)	inside rSNPs	diseases
4	nsv1031	chr13:48766510-48790172	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3518051	chr13:48778434-48785921	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3518063	chr13:48778434-48785921	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv498811	chr13:48778651-48785786	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv13983	chr13:48782466-48785802	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv514697	chr13:48783003-48784891	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:48783600-48784200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
2	chr13:48783600-48785000	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr13:48783600-48785000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr13:48783600-48785000	Enhancers	NHEK	skin
5	chr13:48783600-48785200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr13:48783600-48785200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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