Variant report
| Variant | rs8001549 |
|---|---|
| Chromosome Location | chr13:79947668-79947669 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr13:79886600-79950200 | Weak transcription | Fetal Brain Male | brain |
| 2 | chr13:79893200-79957800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 3 | chr13:79894400-79950200 | Weak transcription | Stomach Mucosa | stomach |
| 4 | chr13:79923000-79950600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 5 | chr13:79936800-79948600 | Weak transcription | Fetal Heart | heart |
| 6 | chr13:79941200-79948000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 7 | chr13:79941200-79950200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 8 | chr13:79941200-79951000 | Weak transcription | Aorta | Aorta |
| 9 | chr13:79941800-79956600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 10 | chr13:79942000-79950200 | Weak transcription | Small Intestine | intestine |
| 11 | chr13:79942000-79950400 | Weak transcription | Gastric | stomach |
| 12 | chr13:79942000-79967400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 13 | chr13:79942400-79948200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 14 | chr13:79942400-79948200 | Weak transcription | Right Ventricle | heart |
| 15 | chr13:79942400-79950600 | Weak transcription | Pancreas | Pancrea |
| 16 | chr13:79943000-79957800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 17 | chr13:79943800-79948000 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 18 | chr13:79944400-79950400 | Weak transcription | Spleen | Spleen |
| 19 | chr13:79944400-79951000 | Weak transcription | Esophagus | oesophagus |
| 20 | chr13:79944800-79950200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 21 | chr13:79944800-79950200 | Weak transcription | Brain Angular Gyrus | brain |
| 22 | chr13:79945000-79949400 | Weak transcription | Brain Hippocampus Middle | brain |
| 23 | chr13:79945200-79948200 | Weak transcription | Fetal Brain Female | brain |
| 24 | chr13:79945200-79950400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 25 | chr13:79945400-79948000 | Weak transcription | K562 | blood |
| 26 | chr13:79945400-79948200 | Weak transcription | Fetal Stomach | stomach |
| 27 | chr13:79945400-79948200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 28 | chr13:79945400-79949600 | Weak transcription | Brain Germinal Matrix | brain |
| 29 | chr13:79945400-79950600 | Weak transcription | Brain Substantia Nigra | brain |
| 30 | chr13:79945800-79948800 | Weak transcription | Brain Anterior Caudate | brain |
| 31 | chr13:79946000-79948000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 32 | chr13:79946000-79948000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 33 | chr13:79946000-79948400 | Weak transcription | Psoas Muscle | Psoas |
| 34 | chr13:79946000-79949400 | Weak transcription | NH-A | brain |
| 35 | chr13:79946000-79949600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 36 | chr13:79946000-79949600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 37 | chr13:79946000-79950000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 38 | chr13:79946000-79950000 | Weak transcription | Colon Smooth Muscle | Colon |
| 39 | chr13:79946000-79960000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 40 | chr13:79946200-79948000 | Weak transcription | Primary B cells from cord blood | blood |
| 41 | chr13:79946200-79948000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 42 | chr13:79946200-79948000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 43 | chr13:79946200-79948000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 44 | chr13:79946200-79948000 | Weak transcription | NHDF-Ad | bronchial |
| 45 | chr13:79946200-79948200 | Weak transcription | Hela-S3 | cervix |
| 46 | chr13:79946200-79949400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 47 | chr13:79946200-79949400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 48 | chr13:79946200-79949600 | Weak transcription | Placenta | Placenta |
| 49 | chr13:79946200-79950000 | Weak transcription | HMEC | breast |
| 50 | chr13:79946200-79950000 | Weak transcription | HSMMtube | muscle |
