| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv532962 |
chrX:153564946-153870337 |
Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
199 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv532964 |
chrX:153622940-153854307 |
Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
158 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
esv3648994 |
chrX:153829693-153919915 |
Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv518228 |
chrX:153829693-153919915 |
Strong transcription Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv3347979 |
chrX:153836429-153878781 |
Enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved
Feedback
Last update: Aug 31, 2015