Variant report

Variant	rs8007776
Chromosome Location	chr14:97228486-97228487
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:97227243..97228783-chr14:97241088..97242954,2	K562	blood:
2	chr14:97223777..97225911-chr14:97227837..97229384,2	K562	blood:

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs41443751	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4900341	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4900342	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4905534	1.00[CHB][hapmap]
rs4905540	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4905554	1.00[CHB][hapmap]
rs55676539	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs55841808	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs55892024	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs55909735	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs55946529	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs55967054	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56056633	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56096836	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs56097548	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs56128300	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs66466321	0.87[EUR][1000 genomes]
rs7145138	0.81[EUR][1000 genomes]
rs72708750	0.84[EUR][1000 genomes]
rs72708755	0.84[EUR][1000 genomes]
rs72708758	0.84[EUR][1000 genomes]
rs72708763	0.84[EUR][1000 genomes]
rs72708765	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72708767	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72708773	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72708790	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72708797	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048302	chr14:97000845-97250538	Bivalent/Poised TSS Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv1041078	chr14:97001679-97279220	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
3	nsv1050075	chr14:97004951-97279220	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
4	nsv1044202	chr14:97155291-97683983	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
5	nsv542179	chr14:97155291-97683983	Weak transcription Strong transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:97224400-97228800	Weak transcription	K562	blood

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