Variant report

Variant	rs8010194
Chromosome Location	chr14:55391902-55391903
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11851287	0.95[AFR][1000 genomes]
rs12100717	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12100729	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17128082	0.89[AFR][1000 genomes]
rs7157783	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs8003017	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs8008931	1.00[AMR][1000 genomes]
rs8019149	0.87[AMR][1000 genomes]
rs8019791	0.85[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932970	chr14:55326559-55532749	Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	49 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:55389600-55406600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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