Variant report

Variant	rs8017465
Chromosome Location	chr14:72117156-72117157
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs3784064	0.82[MKK][hapmap]
rs3825719	0.82[MKK][hapmap]
rs4899398	0.82[MKK][hapmap]
rs8006582	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498021	chr14:71874708-72128721	Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv3398985	chr14:71927884-72404676	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:100 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72073200-72137800	Weak transcription	Esophagus	oesophagus
2	chr14:72082600-72125000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
3	chr14:72083600-72118000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
4	chr14:72083600-72128200	Weak transcription	Spleen	Spleen
5	chr14:72088200-72159600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
6	chr14:72090000-72124200	Weak transcription	Hela-S3	cervix
7	chr14:72091000-72127400	Weak transcription	Pancreas	Pancrea
8	chr14:72091600-72117200	Weak transcription	Primary T cells fromperipheralblood	blood
9	chr14:72099400-72117200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
10	chr14:72099400-72118400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr14:72100000-72118400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr14:72106000-72125000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr14:72109200-72117800	Weak transcription	Fetal Lung	lung
14	chr14:72109200-72137800	Weak transcription	Fetal Stomach	stomach
15	chr14:72109800-72150800	Weak transcription	Colonic Mucosa	Colon
16	chr14:72110000-72117200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr14:72110000-72118200	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr14:72110600-72117200	Weak transcription	Brain Cingulate Gyrus	brain
19	chr14:72111200-72139000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr14:72111400-72117600	Weak transcription	Primary hematopoietic stem cells	blood
21	chr14:72111400-72117800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
22	chr14:72112000-72117200	Weak transcription	Thymus	Thymus
23	chr14:72112000-72118000	Weak transcription	Small Intestine	intestine
24	chr14:72112000-72128000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr14:72113600-72118400	Weak transcription	HSMMtube	muscle
26	chr14:72113800-72117200	Weak transcription	Rectal Mucosa Donor 31	rectum
27	chr14:72113800-72141600	Weak transcription	Placenta Amnion	Placenta Amnion
28	chr14:72114000-72117200	Weak transcription	Rectal Mucosa Donor 29	rectum
29	chr14:72114000-72117400	Enhancers	iPS-18 Cell Line	embryonic stem cell
30	chr14:72114400-72118400	Weak transcription	Fetal Intestine Large	intestine
31	chr14:72114400-72118400	Weak transcription	Sigmoid Colon	Sigmoid Colon
32	chr14:72114400-72126000	Weak transcription	Stomach Mucosa	stomach
33	chr14:72114400-72138000	Weak transcription	Gastric	stomach
34	chr14:72114600-72117400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr14:72114600-72117600	Weak transcription	Fetal Heart	heart
36	chr14:72114600-72118200	Weak transcription	HMEC	breast
37	chr14:72114600-72118600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
38	chr14:72115000-72133800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr14:72115200-72117200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
40	chr14:72115400-72117200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr14:72115600-72117600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr14:72115600-72118200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
43	chr14:72115600-72125200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
44	chr14:72115800-72117600	Weak transcription	Pancreatic Islets	Pancreatic Islet
45	chr14:72115800-72117800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr14:72115800-72118200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
47	chr14:72116000-72117200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
48	chr14:72116200-72117200	Weak transcription	NHDF-Ad	bronchial
49	chr14:72116200-72118400	Weak transcription	H1 Cell Line	embryonic stem cell
50	chr14:72116400-72118200	Enhancers	Cortex derived primary cultured neurospheres	brain

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