Variant report

Variant	rs80186674
Chromosome Location	chr7:66478167-66478168
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758118	chr7:66401430-66859253	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
2	esv2759535	chr7:66401430-66859253	Weak transcription Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
3	nsv1032575	chr7:66432853-66576034	Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
4	nsv981515	chr7:66477535-66532313	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:66462200-66482600	Weak transcription	Aorta	Aorta
2	chr7:66462400-66478400	Weak transcription	Pancreas	Pancrea
3	chr7:66462400-66479400	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr7:66462400-66482200	Weak transcription	Small Intestine	intestine
5	chr7:66462400-66482600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
6	chr7:66462400-66490000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr7:66462400-66496000	Weak transcription	Placenta Amnion	Placenta Amnion
8	chr7:66462400-66500200	Weak transcription	Psoas Muscle	Psoas
9	chr7:66462400-66508000	Weak transcription	Stomach Mucosa	stomach
10	chr7:66462600-66479000	Weak transcription	Fetal Brain Female	brain
11	chr7:66462600-66479200	Weak transcription	Fetal Kidney	kidney
12	chr7:66462600-66480600	Weak transcription	Rectal Smooth Muscle	rectum
13	chr7:66462600-66482800	Weak transcription	NHEK	skin
14	chr7:66462600-66484600	Weak transcription	HUVEC	blood vessel
15	chr7:66462600-66487600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr7:66462600-66497200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
17	chr7:66462800-66494600	Weak transcription	Esophagus	oesophagus
18	chr7:66463000-66487200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
19	chr7:66463000-66507800	Weak transcription	Fetal Brain Male	brain
20	chr7:66463200-66482600	Weak transcription	HMEC	breast
21	chr7:66463200-66483000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
22	chr7:66463200-66484800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr7:66463200-66487400	Weak transcription	NH-A	brain
24	chr7:66463200-66510000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
25	chr7:66464400-66478400	Weak transcription	Spleen	Spleen
26	chr7:66467000-66480600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
27	chr7:66468600-66484400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr7:66469000-66480600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr7:66469000-66484400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
30	chr7:66469200-66479800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
31	chr7:66469200-66482800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
32	chr7:66470000-66489000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
33	chr7:66470000-66489000	Strong transcription	Fetal Intestine Small	intestine
34	chr7:66470200-66488200	Strong transcription	Primary T helper cells PMA-I stimulated	--
35	chr7:66470200-66488400	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
36	chr7:66470200-66488400	Strong transcription	Fetal Stomach	stomach
37	chr7:66470200-66492200	Strong transcription	Primary B cells from peripheral blood	blood
38	chr7:66470400-66478600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
39	chr7:66470400-66484400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr7:66470400-66488000	Strong transcription	Dnd41	blood
41	chr7:66470400-66489000	Strong transcription	Primary monocytes fromperipheralblood	blood
42	chr7:66470400-66495200	Strong transcription	Primary T helper cells fromperipheralblood	blood
43	chr7:66470600-66479000	Strong transcription	Thymus	Thymus
44	chr7:66470600-66481000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chr7:66470600-66485400	Strong transcription	Placenta	Placenta
46	chr7:66470600-66492600	Strong transcription	Liver	Liver
47	chr7:66470600-66494800	Strong transcription	Monocytes-CD14+_RO01746	blood
48	chr7:66470800-66481200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
49	chr7:66470800-66481600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
50	chr7:66471200-66479000	Weak transcription	Primary neutrophils fromperipheralblood	blood

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