Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:22081094..22083875-chr14:22197364..22199332,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10132760	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10139221	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11157162	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11157167	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12590415	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12590420	0.82[ASN][1000 genomes]
rs1997531	0.83[EUR][1000 genomes]
rs1997532	0.87[AFR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1997533	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2320056	0.82[ASN][1000 genomes]
rs60055660	0.83[EUR][1000 genomes]
rs7150049	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8006524	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8011341	0.83[EUR][1000 genomes]
rs8011509	0.80[AFR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8011979	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8012897	0.87[EUR][1000 genomes]
rs8017524	0.83[ASN][1000 genomes]
rs8018604	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8022088	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042309	chr14:22042511-22866936	Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	90 gene(s)	inside rSNPs	diseases
2	nsv456147	chr14:22073473-22305071	Enhancers Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
3	nsv563851	chr14:22073473-22305071	Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
4	nsv510629	chr14:22134425-22215842	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:22188400-22209600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:22197600-22198000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr14:22197600-22198200	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr14:22197600-22198600	Enhancers	Primary T helper naive cells from peripheral blood	blood
5	chr14:22197800-22198200	Enhancers	Primary T cells fromperipheralblood	blood

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