Variant report
| Variant | rs8025701 |
|---|---|
| Chromosome Location | chr15:52535597-52535598 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:52497400-52535600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 2 | chr15:52497800-52549000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 3 | chr15:52505600-52549200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 4 | chr15:52506400-52548800 | Weak transcription | Fetal Kidney | kidney |
| 5 | chr15:52509400-52537200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 6 | chr15:52514000-52539400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 7 | chr15:52516000-52549400 | Weak transcription | Left Ventricle | heart |
| 8 | chr15:52523400-52548600 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 9 | chr15:52524400-52579400 | Weak transcription | Small Intestine | intestine |
| 10 | chr15:52525800-52554000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 11 | chr15:52526000-52548800 | Weak transcription | Brain Hippocampus Middle | brain |
| 12 | chr15:52526200-52548200 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 13 | chr15:52527400-52548200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 14 | chr15:52527800-52535800 | Weak transcription | Brain Anterior Caudate | brain |
| 15 | chr15:52528000-52548800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 16 | chr15:52528000-52548800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 17 | chr15:52528200-52537000 | Weak transcription | Thymus | Thymus |
| 18 | chr15:52528600-52535600 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 19 | chr15:52528600-52542600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 20 | chr15:52528600-52549600 | Weak transcription | Right Ventricle | heart |
| 21 | chr15:52530000-52537600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 22 | chr15:52530400-52535800 | Weak transcription | Primary B cells from cord blood | blood |
| 23 | chr15:52531600-52548600 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 24 | chr15:52532000-52536400 | Weak transcription | Stomach Mucosa | stomach |
| 25 | chr15:52532000-52549000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 26 | chr15:52533200-52540000 | Strong transcription | A549 | lung |
| 27 | chr15:52533200-52540800 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 28 | chr15:52533400-52542400 | Strong transcription | Fetal Muscle Trunk | muscle |
| 29 | chr15:52533600-52542200 | Strong transcription | H9 Cell Line | embryonic stem cell |
| 30 | chr15:52533800-52537200 | Enhancers | Primary B cells from peripheral blood | blood |
| 31 | chr15:52533800-52538200 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 32 | chr15:52533800-52539600 | Strong transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 33 | chr15:52533800-52539800 | Strong transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 34 | chr15:52533800-52540000 | Strong transcription | Duodenum Mucosa | Duodenum |
| 35 | chr15:52533800-52541600 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 36 | chr15:52533800-52542000 | Strong transcription | Gastric | stomach |
| 37 | chr15:52533800-52543200 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 38 | chr15:52533800-52543200 | Strong transcription | HepG2 | liver |
| 39 | chr15:52533800-52543600 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 40 | chr15:52533800-52543600 | Strong transcription | Pancreas | Pancrea |
| 41 | chr15:52533800-52544400 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 42 | chr15:52533800-52544400 | Strong transcription | Fetal Intestine Small | intestine |
| 43 | chr15:52533800-52546000 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 44 | chr15:52533800-52548600 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 45 | chr15:52533800-52548800 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 46 | chr15:52534000-52536200 | Strong transcription | Fetal Muscle Leg | muscle |
| 47 | chr15:52534000-52536200 | Strong transcription | Lung | lung |
| 48 | chr15:52534000-52536600 | Strong transcription | Pancreatic Islets | Pancreatic Islet |
| 49 | chr15:52534000-52537200 | Strong transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 50 | chr15:52534000-52538000 | Strong transcription | Colonic Mucosa | Colon |
