Variant report

Variant	rs8026941
Chromosome Location	chr15:62126049-62126050
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11555594	0.94[AFR][1000 genomes]
rs11555595	0.94[AFR][1000 genomes]
rs11555597	0.83[AFR][1000 genomes]
rs8030588	0.94[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv904284	chr15:62123600-62243197	Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:62121800-62126600	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr15:62123400-62126400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
3	chr15:62124200-62126600	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr15:62124200-62127600	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr15:62124200-62127600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr15:62126000-62126200	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr15:62126000-62126400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
8	chr15:62126000-62126400	Enhancers	Spleen	Spleen
9	chr15:62126000-62128200	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
10	chr15:62126000-62128200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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