Variant report

Variant rs8040200
Chromosome Location chr15:33130493-33130494
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:33061200-33141000 Weak transcription Placenta Placenta
2 chr15:33096200-33154000 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr15:33096400-33159000 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr15:33103800-33139200 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr15:33112000-33130600 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr15:33117800-33130800 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr15:33117800-33131000 Weak transcription Stomach Smooth Muscle stomach
8 chr15:33118600-33159000 Weak transcription Gastric stomach
9 chr15:33119400-33131600 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr15:33121800-33130600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr15:33123000-33130800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr15:33124600-33131200 Weak transcription Lung lung
13 chr15:33126000-33131200 Weak transcription Stomach Mucosa stomach
14 chr15:33126200-33131000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr15:33127000-33131000 Weak transcription HSMMtube muscle
16 chr15:33127000-33141400 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr15:33127200-33131400 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr15:33128000-33130800 Weak transcription Duodenum Mucosa Duodenum
19 chr15:33128400-33131400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr15:33128800-33130800 Weak transcription Fetal Stomach stomach
21 chr15:33129200-33131600 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
22 chr15:33129600-33130800 Enhancers NHDF-Ad bronchial
23 chr15:33129800-33130600 Enhancers Pancreatic Islets Pancreatic Islet
24 chr15:33130000-33130600 Enhancers Brain Cingulate Gyrus brain
25 chr15:33130000-33130600 Enhancers Brain Inferior Temporal Lobe brain
26 chr15:33130000-33130600 Enhancers Brain Substantia Nigra brain
27 chr15:33130000-33130800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr15:33130000-33131000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
29 chr15:33130000-33131000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
30 chr15:33130000-33131200 Enhancers NHLF lung
31 chr15:33130000-33133400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr15:33130000-33136200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr15:33130200-33130600 Enhancers Brain Anterior Caudate brain
34 chr15:33130200-33130800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr15:33130200-33130800 Enhancers A549 lung
36 chr15:33130200-33131000 Enhancers Osteobl bone
37 chr15:33130200-33131400 Enhancers Brain Germinal Matrix brain
38 chr15:33130400-33130800 Flanking Active TSS Brain Hippocampus Middle brain
39 chr15:33130400-33131400 Active TSS Brain Angular Gyrus brain
40 chr15:33130400-33131800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr15:33130400-33132000 Enhancers HepG2 liver
42 chr15:33130400-33132600 Enhancers HSMM muscle
43 chr15:33130400-33133200 Flanking Active TSS Muscle Satellite Cultured Cells --
44 chr15:33130400-33133600 Enhancers NH-A brain

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