Variant report

Variant	rs8041061
Chromosome Location	chr15:61124838-61124839
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs8042149	0.93[CHD][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049839	chr15:61095001-61275125	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:61112400-61128200	Weak transcription	Primary T cells from cord blood	blood
2	chr15:61115800-61130000	Weak transcription	Primary T helper cells fromperipheralblood	blood
3	chr15:61115800-61131600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr15:61115800-61133600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr15:61116000-61130200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr15:61120000-61130000	Weak transcription	Left Ventricle	heart
7	chr15:61121800-61126000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr15:61123200-61126600	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr15:61123200-61142000	Weak transcription	Fetal Stomach	stomach
10	chr15:61123400-61127600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr15:61123400-61128000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr15:61123600-61127800	Weak transcription	NHDF-Ad	bronchial
13	chr15:61123600-61128200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr15:61123600-61145200	Weak transcription	Right Ventricle	heart
15	chr15:61124000-61126000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
16	chr15:61124000-61128000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr15:61124600-61126000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
18	chr15:61124600-61127200	Weak transcription	Psoas Muscle	Psoas
19	chr15:61124800-61127800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links