Variant report

Variant	rs8059037
Chromosome Location	chr16:64921939-64921940
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs11859134	1.00[AMR][1000 genomes]
rs11861754	1.00[AMR][1000 genomes]
rs11862966	1.00[AMR][1000 genomes]
rs11866768	1.00[AMR][1000 genomes]
rs11866805	1.00[AMR][1000 genomes]
rs11866836	1.00[AMR][1000 genomes]
rs12934795	1.00[AMR][1000 genomes]
rs1366514	1.00[AMR][1000 genomes]
rs1428766	1.00[AMR][1000 genomes]
rs1428767	1.00[AMR][1000 genomes]
rs1428768	1.00[AMR][1000 genomes]
rs1428769	1.00[AMR][1000 genomes]
rs16968014	1.00[AMR][1000 genomes]
rs16968015	1.00[AMR][1000 genomes]
rs16968017	1.00[AMR][1000 genomes]
rs16968019	1.00[AMR][1000 genomes]
rs16968021	1.00[AMR][1000 genomes]
rs16968022	1.00[AMR][1000 genomes]
rs16968025	1.00[AMR][1000 genomes]
rs16968027	1.00[AMR][1000 genomes]
rs2115394	0.98[ASN][1000 genomes]
rs2331441	1.00[AMR][1000 genomes]
rs35330546	1.00[AMR][1000 genomes]
rs58314904	0.96[ASN][1000 genomes]
rs58646533	0.95[ASN][1000 genomes]
rs60175491	0.89[ASN][1000 genomes]
rs7203839	1.00[AMR][1000 genomes]
rs7204181	1.00[AMR][1000 genomes]
rs7205343	1.00[AMR][1000 genomes]
rs8047715	1.00[AMR][1000 genomes]
rs8048894	1.00[AMR][1000 genomes]
rs8049255	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948640	chr16:64859061-65112790	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
2	nsv457512	chr16:64887354-64935433	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv572900	chr16:64887354-64935433	Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv984501	chr16:64919797-64993897	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:64900800-64934400	Weak transcription	Fetal Brain Male	brain
2	chr16:64919800-64923200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr16:64920600-64925800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr16:64921200-64922000	Enhancers	Fetal Lung	lung
5	chr16:64921800-64922000	Enhancers	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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