Variant report

Variant	rs8064440
Chromosome Location	chr17:66559178-66559179
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:66549495..66551918-chr17:66557024..66559902,2	MCF-7	breast:

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833524	chr17:66524030-66705194	Enhancers Weak transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:66534200-66563200	Weak transcription	Ovary	ovary
2	chr17:66537200-66561800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr17:66537800-66562600	Weak transcription	HepG2	liver
4	chr17:66538800-66575800	Weak transcription	Spleen	Spleen
5	chr17:66539200-66588000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr17:66540200-66563400	Weak transcription	Placenta	Placenta
7	chr17:66541000-66560000	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr17:66544800-66563600	Weak transcription	Stomach Mucosa	stomach
9	chr17:66551800-66560600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr17:66551800-66560600	Weak transcription	Lung	lung
11	chr17:66551800-66562000	Weak transcription	Right Ventricle	heart
12	chr17:66551800-66567400	Weak transcription	Fetal Stomach	stomach
13	chr17:66551800-66570600	Weak transcription	HUES6 Cell Line	embryonic stem cell
14	chr17:66551800-66572000	Weak transcription	Gastric	stomach
15	chr17:66551800-66587800	Weak transcription	H1 Cell Line	embryonic stem cell
16	chr17:66552000-66584200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr17:66552000-66585200	Weak transcription	HUES48 Cell Line	embryonic stem cell
18	chr17:66552200-66562400	Weak transcription	Osteobl	bone
19	chr17:66554600-66566400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr17:66555200-66559400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr17:66557600-66562000	Weak transcription	Fetal Lung	lung
22	chr17:66557800-66560200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr17:66558000-66559200	Enhancers	Liver	Liver
24	chr17:66558600-66559600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr17:66558800-66559200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr17:66558800-66559200	Enhancers	Adipose Nuclei	Adipose
27	chr17:66558800-66566800	Weak transcription	Fetal Heart	heart
28	chr17:66559000-66559200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
29	chr17:66559000-66559200	Enhancers	Skeletal Muscle Female	skeletal muscle

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