Variant report

Variant	rs8065286
Chromosome Location	chr17:33864479-33864480
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:33836676..33838220-chr17:33863138..33865744,2	K562	blood:

Variant related genes	Relation type
ENSG00000267074	Chromatin interaction

Extended variants
information (count: 9 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11654357	0.90[CEU][hapmap];0.89[EUR][1000 genomes]
rs1470313	0.80[ASN][1000 genomes]
rs7501448	0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1055936	chr17:33327166-33884184	Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	112 gene(s)	inside rSNPs	diseases
2	nsv543317	chr17:33327166-33884184	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	112 gene(s)	inside rSNPs	diseases
3	nsv534371	chr17:33456878-34094068	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	137 gene(s)	inside rSNPs	diseases
4	nsv519981	chr17:33841737-33864479	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv574754	chr17:33841737-33881631	Enhancers Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
6	nsv908079	chr17:33849869-34034851	Active TSS Strong transcription Flanking Active TSS Enhancers Weak transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs8065286	CCL14-CCL15	cis	cerebellum	SCAN

Chromatin state (count:52 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:33860000-33865800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
2	chr17:33860400-33865200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr17:33860600-33866200	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr17:33861000-33864800	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
5	chr17:33861400-33864600	Active TSS	Duodenum Mucosa	Duodenum
6	chr17:33861400-33865000	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
7	chr17:33861400-33865000	Active TSS	Rectal Mucosa Donor 29	rectum
8	chr17:33861600-33865200	Active TSS	GM12878-XiMat	blood
9	chr17:33862000-33865000	Active TSS	Primary T killer memory cells from peripheral blood	blood
10	chr17:33862800-33865000	Active TSS	Primary T killer naive cells fromperipheralblood	blood
11	chr17:33862800-33865400	Weak transcription	Liver	Liver
12	chr17:33862800-33869400	Weak transcription	Spleen	Spleen
13	chr17:33863000-33865000	Active TSS	Primary T helper cells PMA-I stimulated	--
14	chr17:33863000-33865600	Flanking Active TSS	Primary T cells from cord blood	blood
15	chr17:33863200-33864600	Active TSS	Primary T helper naive cells fromperipheralblood	blood
16	chr17:33863200-33864800	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
17	chr17:33863200-33865000	Active TSS	Primary T helper naive cells from peripheral blood	blood
18	chr17:33863200-33865200	Active TSS	Primary T cells fromperipheralblood	blood
19	chr17:33863600-33864600	Flanking Active TSS	Fetal Thymus	thymus
20	chr17:33863600-33864800	Active TSS	Primary T regulatory cells fromperipheralblood	blood
21	chr17:33863600-33864800	Active TSS	Rectal Mucosa Donor 31	rectum
22	chr17:33863600-33864800	Active TSS	Rectal Smooth Muscle	rectum
23	chr17:33863800-33865000	Enhancers	Primary B cells from peripheral blood	blood
24	chr17:33864000-33864600	Enhancers	Stomach Smooth Muscle	stomach
25	chr17:33864000-33864800	Flanking Active TSS	Adipose Nuclei	Adipose
26	chr17:33864000-33864800	Flanking Active TSS	Fetal Lung	lung
27	chr17:33864000-33865400	Enhancers	Fetal Stomach	stomach
28	chr17:33864000-33866000	Enhancers	K562	blood
29	chr17:33864000-33866600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
30	chr17:33864200-33864600	Enhancers	Psoas Muscle	Psoas
31	chr17:33864200-33864600	Enhancers	Small Intestine	intestine
32	chr17:33864200-33864600	Flanking Active TSS	Thymus	Thymus
33	chr17:33864200-33864800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr17:33864200-33864800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
35	chr17:33864200-33864800	Enhancers	Fetal Muscle Leg	muscle
36	chr17:33864200-33865000	Enhancers	Primary hematopoietic stem cells	blood
37	chr17:33864200-33865200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr17:33864200-33866400	Weak transcription	Primary monocytes fromperipheralblood	blood
39	chr17:33864200-33867200	Flanking Active TSS	Dnd41	blood
40	chr17:33864200-33867800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
41	chr17:33864400-33864600	Active TSS	Primary T helper 17 cells PMA-I stimulated	--
42	chr17:33864400-33864600	Enhancers	Fetal Intestine Small	intestine
43	chr17:33864400-33864800	Active TSS	Left Ventricle	heart
44	chr17:33864400-33864800	Active TSS	Right Atrium	heart
45	chr17:33864400-33865200	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
46	chr17:33864400-33865400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr17:33864400-33865400	Enhancers	Duodenum Smooth Muscle	Duodenum
48	chr17:33864400-33865600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr17:33864400-33865600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr17:33864400-33866800	Weak transcription	Colon Smooth Muscle	Colon

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