The 2.0 version of rSNPBase

Variant report

Variant rs8066507
Chromosome Location chr17:38700486-38700487
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:38692000-38700600 Enhancers Fetal Stomach stomach
2 chr17:38692200-38700600 Enhancers Placenta Placenta
3 chr17:38692200-38700600 Enhancers HepG2 liver
4 chr17:38692600-38701000 Enhancers Fetal Muscle Leg muscle
5 chr17:38692800-38700800 Enhancers Liver Liver
6 chr17:38693200-38700600 Enhancers Fetal Muscle Trunk muscle
7 chr17:38693400-38701800 Weak transcription Gastric stomach
8 chr17:38697800-38700800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
9 chr17:38698000-38708400 Enhancers Fetal Thymus thymus
10 chr17:38698200-38700600 Enhancers Thymus Thymus
11 chr17:38698200-38701000 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr17:38698200-38701000 Enhancers Primary T helper cells fromperipheralblood blood
13 chr17:38698200-38701000 Enhancers Primary T killer naive cells fromperipheralblood blood
14 chr17:38698200-38708200 Enhancers Primary T cells fromperipheralblood blood
15 chr17:38698400-38703600 Enhancers Primary T killer memory cells from peripheral blood blood
16 chr17:38698400-38704800 Weak transcription H9 Cell Line embryonic stem cell
17 chr17:38698600-38701000 Enhancers Primary T helper naive cells from peripheral blood blood
18 chr17:38698800-38703600 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr17:38699000-38702200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr17:38699200-38701000 Enhancers Primary T helper cells PMA-I stimulated --
21 chr17:38699200-38703400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr17:38699200-38703600 Weak transcription Brain Cingulate Gyrus brain
23 chr17:38699200-38703800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr17:38699400-38703200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr17:38699400-38703600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr17:38699400-38703800 Weak transcription Brain Hippocampus Middle brain
27 chr17:38699400-38710200 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr17:38699600-38703400 Weak transcription Primary hematopoietic stem cells blood
29 chr17:38699600-38703400 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr17:38699600-38703400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr17:38699600-38703400 Weak transcription Fetal Brain Female brain
32 chr17:38699600-38703800 Weak transcription Brain Substantia Nigra brain
33 chr17:38699600-38704800 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr17:38699600-38707800 Weak transcription Brain Angular Gyrus brain
35 chr17:38699600-38709800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr17:38699800-38703400 Weak transcription Muscle Satellite Cultured Cells --
37 chr17:38699800-38703800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr17:38699800-38703800 Weak transcription Stomach Mucosa stomach
39 chr17:38699800-38704000 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr17:38699800-38704000 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr17:38699800-38704800 Weak transcription Fetal Intestine Large intestine
42 chr17:38699800-38705000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr17:38699800-38705000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr17:38699800-38705000 Weak transcription Brain Anterior Caudate brain
45 chr17:38700000-38700600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
46 chr17:38700000-38700800 Enhancers Primary T helper 17 cells PMA-I stimulated --
47 chr17:38700000-38700800 Enhancers Primary Natural Killer cells fromperipheralblood blood
48 chr17:38700000-38701000 Enhancers A549 lung
49 chr17:38700000-38701400 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr17:38700000-38701600 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015