Variant report

Variant	rs8076667
Chromosome Location	chr17:62992232-62992233
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs1967988	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1066765	chr17:62649313-63124303	Flanking Active TSS Active TSS Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
2	nsv530764	chr17:62939944-63278472	Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Strong transcription Bivalent Enhancer Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
3	nsv960522	chr17:62966916-62994102	Enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:62981200-63018400	Weak transcription	Pancreas	Pancrea
2	chr17:62982600-63005000	Weak transcription	Right Ventricle	heart
3	chr17:62985000-63018000	Weak transcription	Aorta	Aorta
4	chr17:62985800-62993600	Weak transcription	Primary B cells from peripheral blood	blood
5	chr17:62986000-62994800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
6	chr17:62986000-63000800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr17:62986000-63003200	Weak transcription	Colon Smooth Muscle	Colon
8	chr17:62986200-62998200	Weak transcription	Stomach Smooth Muscle	stomach
9	chr17:62989000-63013600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr17:62990200-62994200	Weak transcription	Fetal Lung	lung
11	chr17:62990600-63008200	Weak transcription	NHEK	skin
12	chr17:62991200-62992400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr17:62991200-62997400	Weak transcription	Placenta	Placenta
14	chr17:62991200-62998600	Weak transcription	Esophagus	oesophagus
15	chr17:62991200-62998800	Weak transcription	HMEC	breast
16	chr17:62991200-63013600	Weak transcription	Fetal Intestine Small	intestine
17	chr17:62991600-62994800	Weak transcription	Psoas Muscle	Psoas
18	chr17:62991600-63006400	Weak transcription	Right Atrium	heart
19	chr17:62991800-62997000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr17:62992000-62995000	Weak transcription	Skeletal Muscle Female	skeletal muscle
21	chr17:62992000-62995200	Weak transcription	Skeletal Muscle Male	skeletal muscle

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