The 2.0 version of rSNPBase

Variant report

Variant rs8077256
Chromosome Location chr17:38430592-38430593
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:38409600-38437400 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr17:38409800-38434800 Strong transcription Cortex derived primary cultured neurospheres brain
3 chr17:38409800-38439400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr17:38411000-38438800 Strong transcription Fetal Intestine Small intestine
5 chr17:38411000-38439800 Strong transcription Fetal Stomach stomach
6 chr17:38412200-38434800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
7 chr17:38412200-38438400 Strong transcription Fetal Muscle Trunk muscle
8 chr17:38412200-38439800 Strong transcription Fetal Thymus thymus
9 chr17:38412400-38437600 Strong transcription Primary T cells fromperipheralblood blood
10 chr17:38412400-38438600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr17:38412400-38438600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr17:38412600-38437600 Strong transcription Placenta Placenta
13 chr17:38412600-38438600 Strong transcription Fetal Intestine Large intestine
14 chr17:38412600-38439200 Strong transcription Fetal Muscle Leg muscle
15 chr17:38412600-38439200 Strong transcription Lung lung
16 chr17:38413000-38438800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr17:38414600-38430600 Strong transcription Primary B cells from cord blood blood
18 chr17:38416200-38436400 Strong transcription HUES64 Cell Line embryonic stem cell
19 chr17:38416600-38431000 Weak transcription Fetal Brain Male brain
20 chr17:38417600-38439400 Strong transcription Fetal Adrenal Gland Adrenal Gland
21 chr17:38420400-38439200 Strong transcription Duodenum Smooth Muscle Duodenum
22 chr17:38421400-38435200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr17:38422200-38432200 Weak transcription Small Intestine intestine
24 chr17:38422200-38435400 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr17:38422800-38433000 Weak transcription H9 Cell Line embryonic stem cell
26 chr17:38423200-38437400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr17:38423400-38431600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr17:38423600-38437800 Weak transcription Fetal Heart heart
29 chr17:38423800-38434200 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr17:38424600-38435200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr17:38425400-38435000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr17:38426000-38437000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr17:38426200-38436600 Strong transcription A549 lung
34 chr17:38426200-38437600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr17:38426400-38438800 Strong transcription Sigmoid Colon Sigmoid Colon
36 chr17:38426600-38430600 Strong transcription Primary hematopoietic stem cells blood
37 chr17:38426600-38430800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr17:38426600-38430800 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr17:38426600-38431000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr17:38426600-38435200 Strong transcription Brain Germinal Matrix brain
41 chr17:38426600-38437400 Strong transcription HUES48 Cell Line embryonic stem cell
42 chr17:38426600-38437600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr17:38426600-38437800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr17:38426600-38437800 Strong transcription Duodenum Mucosa Duodenum
45 chr17:38426600-38437800 Strong transcription Skeletal Muscle Male skeletal muscle
46 chr17:38426600-38437800 Strong transcription HepG2 liver
47 chr17:38426600-38438000 Strong transcription Breast Myoepithelial Primary Cells Breast
48 chr17:38426600-38438000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr17:38426600-38438000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr17:38426600-38438600 Strong transcription GM12878-XiMat blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015