The 2.0 version of rSNPBase

Variant report

Variant rs808
Chromosome Location chr3:56761650-56761651
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:56753400-56766200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr3:56753600-56763000 Weak transcription Brain Substantia Nigra brain
3 chr3:56754200-56762200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr3:56754400-56762400 Weak transcription Brain Germinal Matrix brain
5 chr3:56754400-56783200 Weak transcription Stomach Mucosa stomach
6 chr3:56755000-56762200 Weak transcription Colon Smooth Muscle Colon
7 chr3:56755200-56781800 Weak transcription NH-A brain
8 chr3:56755600-56762400 Weak transcription Rectal Smooth Muscle rectum
9 chr3:56755800-56762200 Weak transcription Pancreas Pancrea
10 chr3:56755800-56763000 Weak transcription Psoas Muscle Psoas
11 chr3:56756000-56762200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr3:56756200-56762400 Weak transcription Stomach Smooth Muscle stomach
13 chr3:56756400-56762400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr3:56756400-56767200 Strong transcription Breast Myoepithelial Primary Cells Breast
15 chr3:56756600-56766200 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr3:56756800-56781000 Weak transcription Fetal Intestine Large intestine
17 chr3:56757000-56786400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
18 chr3:56757200-56762600 Weak transcription Esophagus oesophagus
19 chr3:56757200-56767200 Strong transcription Fetal Muscle Trunk muscle
20 chr3:56757200-56767400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr3:56757600-56792200 Weak transcription Hela-S3 cervix
22 chr3:56758000-56762400 Weak transcription HSMMtube muscle
23 chr3:56758000-56768600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr3:56758000-56768800 Weak transcription NHDF-Ad bronchial
25 chr3:56758400-56762600 Genic enhancers Primary T cells fromperipheralblood blood
26 chr3:56758600-56762400 Genic enhancers Primary T helper cells fromperipheralblood blood
27 chr3:56758600-56762600 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
28 chr3:56758600-56764200 Strong transcription HMEC breast
29 chr3:56758600-56766800 Strong transcription HSMM muscle
30 chr3:56758600-56767000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr3:56758600-56767000 Strong transcription Lung lung
32 chr3:56758600-56792200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr3:56758800-56762400 Genic enhancers Primary T helper cells PMA-I stimulated --
34 chr3:56758800-56763000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr3:56758800-56763200 Weak transcription Fetal Intestine Small intestine
36 chr3:56758800-56763600 Strong transcription Brain Inferior Temporal Lobe brain
37 chr3:56758800-56764800 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr3:56758800-56766400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr3:56758800-56766800 Strong transcription Fetal Muscle Leg muscle
40 chr3:56758800-56767000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr3:56758800-56767000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr3:56758800-56767400 Strong transcription Fetal Adrenal Gland Adrenal Gland
43 chr3:56758800-56770800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr3:56758800-56782800 Strong transcription Primary monocytes fromperipheralblood blood
45 chr3:56759000-56762200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr3:56759000-56763200 Weak transcription Aorta Aorta
47 chr3:56759000-56764000 Strong transcription Skeletal Muscle Female skeletal muscle
48 chr3:56759000-56764200 Strong transcription Left Ventricle heart
49 chr3:56759000-56766600 Strong transcription Adipose Nuclei Adipose
50 chr3:56759000-56774400 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015