Variant report

Variant	rs8084607
Chromosome Location	chr18:30111443-30111444
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr18:30102666..30104547-chr18:30109079..30111493,2	MCF-7	breast:

rs_ID	r²[population]
rs1353011	1.00[EUR][1000 genomes]
rs16963487	1.00[MEX][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap]
rs2052758	1.00[EUR][1000 genomes]
rs61517062	1.00[EUR][1000 genomes]
rs73956900	1.00[EUR][1000 genomes]
rs73958406	1.00[EUR][1000 genomes]

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:30109800-30112200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr18:30109800-30112400	Enhancers	NHEK	skin
3	chr18:30109800-30112600	Enhancers	Fetal Intestine Large	intestine
4	chr18:30109800-30112800	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr18:30110000-30112400	Enhancers	HMEC	breast
6	chr18:30110000-30112600	Enhancers	Fetal Intestine Small	intestine
7	chr18:30110200-30112200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr18:30110800-30111600	Enhancers	Rectal Mucosa Donor 31	rectum
9	chr18:30111000-30111600	Enhancers	Dnd41	blood
10	chr18:30111000-30111600	Enhancers	Hela-S3	cervix
11	chr18:30111000-30111800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
12	chr18:30111000-30112000	Enhancers	Primary hematopoietic stem cells short term culture	blood
13	chr18:30111000-30112000	Enhancers	Primary T helper cells fromperipheralblood	blood
14	chr18:30111000-30112000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
15	chr18:30111000-30112000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr18:30111000-30112000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr18:30111000-30112200	Enhancers	Primary T helper naive cells from peripheral blood	blood
18	chr18:30111000-30112200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
19	chr18:30111000-30112400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr18:30111000-30112400	Enhancers	Primary T cells from cord blood	blood
21	chr18:30111000-30112400	Enhancers	Primary T helper cells PMA-I stimulated	--
22	chr18:30111000-30112400	Enhancers	Stomach Mucosa	stomach
23	chr18:30111200-30111600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
24	chr18:30111200-30112000	Weak transcription	Duodenum Mucosa	Duodenum
25	chr18:30111400-30112400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr18:30111400-30112400	Bivalent Enhancer	Small Intestine	intestine

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links