The 2.0 version of rSNPBase

Variant report

Variant rs8093127
Chromosome Location chr18:13272659-13272660
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:13243600-13278200 Weak transcription Dnd41 blood
2 chr18:13259200-13280000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr18:13261200-13282200 Weak transcription Small Intestine intestine
4 chr18:13267200-13276000 Enhancers Fetal Adrenal Gland Adrenal Gland
5 chr18:13267400-13272800 Enhancers Skeletal Muscle Female skeletal muscle
6 chr18:13267800-13272800 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr18:13268400-13276800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr18:13268600-13273200 Enhancers Fetal Lung lung
9 chr18:13268600-13273800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr18:13268600-13276600 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr18:13269400-13280000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr18:13269600-13272800 Enhancers Right Atrium heart
13 chr18:13269600-13273800 Weak transcription Fetal Brain Female brain
14 chr18:13269600-13274400 Enhancers Right Ventricle heart
15 chr18:13269600-13274600 Enhancers Left Ventricle heart
16 chr18:13270000-13273200 Enhancers Colon Smooth Muscle Colon
17 chr18:13270000-13274000 Weak transcription Fetal Kidney kidney
18 chr18:13270000-13274600 Enhancers HepG2 liver
19 chr18:13270000-13276600 Weak transcription Brain Cingulate Gyrus brain
20 chr18:13270000-13276800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr18:13270000-13279200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr18:13270000-13279800 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr18:13270000-13283800 Weak transcription Brain Inferior Temporal Lobe brain
24 chr18:13270000-13290000 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr18:13270200-13273600 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr18:13270200-13273800 Weak transcription Primary hematopoietic stem cells blood
27 chr18:13270200-13273800 Weak transcription Brain Angular Gyrus brain
28 chr18:13270200-13278400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr18:13270200-13284600 Weak transcription Psoas Muscle Psoas
30 chr18:13270200-13288200 Weak transcription Fetal Intestine Large intestine
31 chr18:13270200-13290200 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr18:13270200-13297600 Weak transcription Colonic Mucosa Colon
33 chr18:13270400-13279600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr18:13270600-13273000 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr18:13270600-13274000 Weak transcription Brain Hippocampus Middle brain
36 chr18:13270600-13274200 Weak transcription Brain Substantia Nigra brain
37 chr18:13270800-13274600 Enhancers Stomach Smooth Muscle stomach
38 chr18:13270800-13279000 Weak transcription Duodenum Mucosa Duodenum
39 chr18:13270800-13279800 Weak transcription Adipose Nuclei Adipose
40 chr18:13270800-13282600 Weak transcription Fetal Intestine Small intestine
41 chr18:13271000-13273200 Enhancers Spleen Spleen
42 chr18:13271400-13273000 Enhancers Primary T cells fromperipheralblood blood
43 chr18:13271400-13273200 Enhancers Pancreas Pancrea
44 chr18:13271400-13273800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
45 chr18:13271400-13281600 Weak transcription Brain Germinal Matrix brain
46 chr18:13271600-13273200 Genic enhancers Thymus Thymus
47 chr18:13271800-13273800 Weak transcription Fetal Brain Male brain
48 chr18:13271800-13274000 Weak transcription Aorta Aorta
49 chr18:13271800-13276600 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr18:13271800-13278600 Weak transcription Liver Liver

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Last update: Aug 31, 2015